No AFmodels/IMGVR_UViG_3300042542_005523|3300042542|Ga0453075_0000002_1177_1938-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS330
Inhibited defense system
CLAN ID CLAN014
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300042542_005523|3300042542|Ga0453075_0000002_1177_1938
gene_page: 253 28178.8 4.573 -11.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF25185
Phrog phrog_332,phrog_457,phrog_6005,phrog_15,phrog_3336
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending type I Thoeris because it belongs to the same clan as family APIS351 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS330 IMGVR_UViG_3300042542_005523|3300042542|Ga0453075_0000002_1177_1938 10 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN014

APIS330 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300042542_005523|3300042542|Ga0453075_0000002_1177_1938 100.000 6.036E-170 522 1.000% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300032307_000764|3300032307|Ga0335334_1114050160 62.800 1.708E-95 307 0.972% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300028025_007001|3300028025|Ga0247723_100012276 69.000 2.960E-107 341 0.972% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300017917_004998|3300017917|Ga0192394_13056487 63.300 1.224E-98 316 1.000% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300047393_000086|3300047393|Ga0466489_000008_7444_8208 51.800 4.829E-74 245 0.984% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300012346_000380|3300012346|Ga0157141_1000001246 52.000 2.852E-75 249 1.000% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300042260_000478|3300042260|Ga0451496_0000744_8737_9486 50.800 1.894E-71 238 0.984% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300043392_000054|3300043392|Ga0451673_000011_180681_181439 55.600 3.826E-81 266 0.984% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300027798_000071|3300027798|Ga0209353_1000012061 52.600 4.829E-74 245 0.972% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336
IMGVR_UViG_3300043422_000086|3300043422|Ga0451741_0000008_21971_22735 52.400 5.922E-76 251 1.000% IMGVR PF25185 phrog_332 phrog_457 phrog_6005 phrog_15 phrog_3336