dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS321

Inhibited defense system

CLAN ID

CLAN003

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300028776_000008\|3300028776\|Ga0302303_1000009918	gene_page:	116	12375.2	4.4552	-3

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26760

Phrog

phrog_1068,phrog_6651,phrog_345,phrog_1328,phrog_88

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I Thoeris,Type II Thoeris because it belongs to the same clan as family APIS288,APIS359,LockinC which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS321	IMGVR_UViG_3300028776_000008\|3300028776\|Ga0302303_1000009918	4	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN003

APIS321 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300028776_000008\|3300028776\|Ga0302303_1000009918	100.000	4.812E-76	243	1.000%	IMGVR	PF26760	phrog_1068 phrog_6651 phrog_345 phrog_1328 phrog_88
IMGVR_UViG_3300011118_000148\|3300011118\|Ga0114922_1000671811	68.400	2.940E-32	117	0.724%	IMGVR	PF26760	phrog_1068 phrog_6651 phrog_345 phrog_1328 phrog_88
IMGVR_UViG_3300035702_000283\|3300035702\|Ga0399894_003495_8538_8846	66.600	2.817E-28	106	0.672%	IMGVR	PF26760	phrog_1068 phrog_6651 phrog_345 phrog_1328 phrog_88
IMGVR_UViG_3300032053_005108\|3300032053\|Ga0315284_100075957	57.200	3.371E-30	111	0.853%	IMGVR	PF26760	phrog_1068 phrog_6651 phrog_345 phrog_1328 phrog_88