dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS316

Inhibited defense system

CLAN ID

CLAN007

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300025162_000075\|3300025162\|Ga0209083_100067022	gene_page:	254	31475.2	9.9829	22

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF25187

Phrog

phrog_1533,phrog_7449,phrog_1200,phrog_1272,phrog_104

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending type III CBASS because it belongs to the same clan as family APIS369 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS316	IMGVR_UViG_3300025162_000075\|3300025162\|Ga0209083_100067022	9	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN007

APIS316 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300025162_000075\|3300025162\|Ga0209083_100067022	100.000	2.408E-183	561	1.000%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104
IMGVR_UViG_3300009502_000053\|3300009502\|Ga0114951_1000040454	100.000	2.408E-183	561	1.000%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104
IMGVR_UViG_3300020048_000026\|3300020048\|Ga0207193_1000073200	64.500	4.418E-101	323	0.996%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104
IMGVR_UViG_3300028734_000010\|3300028734\|Ga0302206_100000486	64.600	4.004E-100	321	0.980%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104
IMGVR_UViG_3300029983_000009\|3300029983\|Ga0302284_1000006415	63.500	1.279E-98	316	0.988%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104
IMGVR_UViG_3300029983_000007\|3300029983\|Ga0302284_1000002332	64.600	4.004E-100	321	0.980%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104
IMGVR_UViG_3300028854_000488\|3300028854\|Ga0302268_1000001372	66.800	4.776E-105	335	0.984%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104
IMGVR_UViG_3300022555_002641\|3300022555\|Ga0212088_1000022846	46.100	1.447E-62	212	0.992%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104
IMGVR_UViG_3300022868_000069\|3300022868\|Ga0222697_100018531	49.400	1.605E-69	232	0.992%	IMGVR	PF25187	phrog_1533 phrog_7449 phrog_1200 phrog_1272 phrog_104