dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS303

Inhibited defense system

CLAN ID

CLAN003

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300024348_001821\|3300024348\|Ga0244776_100291963	gene_page:	220	24102.3	5.3775	-2.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26760

Phrog

phrog_7449,phrog_1538,phrog_104,phrog_2220,phrog_4406

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I Thoeris,Type II Thoeris because it belongs to the same clan as family APIS288,APIS359,LockinC which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS303	IMGVR_UViG_3300024348_001821\|3300024348\|Ga0244776_100291963	12	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN003

APIS303 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300024348_001821\|3300024348\|Ga0244776_100291963	100.000	4.129E-146	451	1.000%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300043436_002376\|3300043436\|Ga0453108_0004551_3697_4338	65.900	7.786E-90	289	1.000%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300042349_000060\|3300042349\|Ga0453943_0002616_1094_1756	90.300	4.661E-134	417	1.000%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300042890_004215\|3300042890\|Ga0453678_0002638_13544_14161	54.900	2.383E-62	210	0.859%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300032288_003229\|3300032288\|Ga0335290_104450319	62.900	8.022E-71	234	0.855%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300027969_002571\|3300027969\|Ga0209191_10147933	43.400	1.563E-40	147	0.850%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300009164_000395\|3300009164\|Ga0114975_100008776	43.400	1.563E-40	147	0.850%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300044591_001791\|3300044591\|Ga0453735_0006759_5488_6117	71.800	1.355E-98	314	0.982%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300042503_000137\|3300042503\|Ga0453078_0010854_327_968	69.300	4.455E-94	301	0.982%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300007102_000044\|3300007102\|Ga0102541_1366518114	58.800	6.043E-65	217	0.855%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300036985_008365\|3300036985\|Ga0393278_0000062_51906_52469	59.700	4.412E-65	218	0.845%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406
IMGVR_UViG_3300033076_000814\|3300033076\|Ga0364575_101895	61.700	9.951E-70	231	0.864%	IMGVR	PF26760	phrog_7449 phrog_1538 phrog_104 phrog_2220 phrog_4406