No AFmodels/IMGVR_UViG_3300033120_000539|3300033120|Ga0364481_1001368-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS278
Inhibited defense system
CLAN ID CLAN007
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300033120_000539|3300033120|Ga0364481_1001368
gene_page: 259 29213.3 9.7735 12.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF25187
Phrog phrog_1535,phrog_4197,phrog_708,phrog_1272,phrog_588
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending type III CBASS because it belongs to the same clan as family APIS369 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS278 IMGVR_UViG_3300033120_000539|3300033120|Ga0364481_1001368 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN007

APIS278 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300033120_000539|3300033120|Ga0364481_1001368 100.000 1.788E-184 564 1.000% IMGVR PF25187 phrog_1535 phrog_4197 phrog_708 phrog_1272 phrog_588
IMGVR_UViG_3300033068_001531|3300033068|Ga0364484_1024551 49.700 1.952E-75 250 0.988% IMGVR PF25187 phrog_1535 phrog_4197 phrog_708 phrog_1272 phrog_588
IMGVR_UViG_3300038393_000928|3300038393|Ga0395904_0000501_36343_37176 58.000 7.815E-95 306 0.996% IMGVR PF25187 phrog_1535 phrog_4197 phrog_708 phrog_1272 phrog_588