Seed proteins |
Seed protein 3D structures |
Structural homologs |
Family infomation |
Homology to other families |
Family members, sources, and their hosts
Seed protein information help
| APIS family ID | APIS266 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Inhibited defense system | ||||||||||||||
| CLAN ID | CLAN003 | |||||||||||||
| Seed protein property |
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| Phage property |
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| PMID/References | ||||||||||||||
| PDB structures | ; | |||||||||||||
| Pfam domains | PF26760 | |||||||||||||
| Phrog | phrog_5218,phrog_6005,phrog_4219,phrog_296,phrog_453 | |||||||||||||
| Host taxa | ||||||||||||||
| Gene Location | Start: ; End: ; Strand: | |||||||||||||
| Description | ||||||||||||||
| Note | This family does not have seed protein, but we infer its function is defending Type I Thoeris,Type II Thoeris because it belongs to the same clan as family APIS288,APIS359,LockinC which has seed protein. | |||||||||||||
Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
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Family information Download help
| Fam ID | Seed protein | Member count | Model | Alignment | APIS266 | IMGVR_UViG_3300020182_000807|3300020182|Ga0206129_1001293418 | 4 | HMM model | Member alignment |
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Host Taxa distribution
Length distribution
Family members, sources, and their hosts help
| Member | pident | evalue | bitscore | qcovs | phage | host | SourceDB | Pfam | Phrog |
|---|---|---|---|---|---|---|---|---|---|
| IMGVR_UViG_3300020182_000807|3300020182|Ga0206129_1001293418 | 100.000 | 6.686E-82 | 261 | 1.000% | IMGVR | PF26760 | phrog_5218 phrog_6005 phrog_4219 phrog_296 phrog_453 | ||
| IMGVR_UViG_3300037296_000217|3300037296|Ga0400260_001259_19634_19954 | 92.500 | 1.220E-60 | 200 | 0.779% | IMGVR | PF26760 | phrog_5218 phrog_6005 phrog_4219 phrog_296 phrog_453 | ||
| IMGVR_UViG_3300027509_000022|3300027509|Ga0209187_100090336 | 76.600 | 3.095E-46 | 158 | 0.763% | IMGVR | PF26760 | phrog_5218 phrog_6005 phrog_4219 phrog_296 phrog_453 | ||
| IMGVR_UViG_3300033004_000033|3300033004|Ga0335084_100133318 | 79.000 | 7.285E-45 | 154 | 0.718% | IMGVR | PF26760 | phrog_5218 phrog_6005 phrog_4219 phrog_296 phrog_453 |