dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS264

Inhibited defense system

CLAN ID

CLAN007

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_2887198475_000005\|2887198475\|2887199704	gene_page:	245	28010.9	9.9695	11

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF25187

Phrog

phrog_1210,phrog_1272,phrog_376,phrog_1139,phrog_1506

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending type III CBASS because it belongs to the same clan as family APIS369 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS264	IMGVR_UViG_2887198475_000005\|2887198475\|2887199704	16	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN007

APIS264 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_2887198475_000005\|2887198475\|2887199704	100.000	1.250E-174	535	1.000%	Rhodovastum atsumiense	IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300035073_000053\|3300035073\|Ga0373478_0000021_26187_26945	36.400	1.700E-41	151	0.914%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300035074_000036\|3300035074\|Ga0373480_0000038_30096_30857	37.900	9.408E-45	160	0.914%	Beijerinckiaceae	IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300021361_000059\|3300021361\|Ga0213872_100027074	38.200	6.882E-45	160	0.918%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300025528_000100\|3300025528\|Ga0207867_10029254	36.900	4.678E-39	143	0.857%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300037140_000024\|3300037140\|Ga0395914_0004310_10104_10787	35.800	3.252E-36	135	0.857%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300031720_000021\|3300031720\|Ga0307469_1000026423	38.100	6.140E-44	158	0.902%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300028024_000077\|3300028024\|Ga0255336_10026753	36.600	8.728E-39	143	0.918%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300009646_000005\|3300009646\|Ga0116132_100026175	37.700	7.480E-43	154	0.910%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300038420_000078\|3300038420\|Ga0427954_0000743_23361_24086	37.400	4.149E-38	141	0.841%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300006023_000007\|3300006023\|Ga0075032_100033016	34.500	1.130E-35	134	0.914%	Pseudomonas	IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300026907_000016\|3300026907\|Ga0209699_10021758	34.500	1.130E-35	134	0.914%	Pseudomonadaceae	IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300002460_002974\|3300002460\|C687J35021_1000006861	35.600	1.200E-33	128	0.861%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300036781_000097\|3300036781\|Ga0376653_0027930_5261_6001	35.800	1.628E-38	142	0.906%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300029171_000002\|3300029171\|Ga0168034_10000244	32.600	1.638E-33	127	0.951%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506
IMGVR_UViG_3300049195_000023\|3300049195\|Ga0498779_001265_1990_2727	38.000	3.038E-38	141	0.833%		IMGVR	PF25187	phrog_1210 phrog_1272 phrog_376 phrog_1139 phrog_1506