dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS262

Inhibited defense system

CLAN ID

CLAN022

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300044691_000180\|3300044691\|Ga0467056_0004566_3192_4124	gene_page:	310	35824	7.7727	6

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF01068

Phrog

phrog_24,phrog_16,phrog_239,phrog_3830,phrog_1

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending AVAST type III because it belongs to the same clan as family APIS312 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS262	IMGVR_UViG_3300044691_000180\|3300044691\|Ga0467056_0004566_3192_4124	22	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN022

APIS262 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300044691_000180\|3300044691\|Ga0467056_0004566_3192_4124	100.000	1.184E-217	663	1.000%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300044691_000183\|3300044691\|Ga0467056_0005854_4486_5418	97.900	2.131E-210	642	1.000%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300046500_000161\|3300046500\|Ga0495596_0001128_13147_14073	48.100	3.961E-80	266	0.958%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300037312_000536\|3300037312\|Ga0395899_0000236_37639_38565	47.400	2.333E-78	261	0.958%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300047447_000291\|3300047447\|Ga0495685_000252_6776_7702	48.000	1.015E-79	265	0.958%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300035670_008809\|3300035670\|Ga0310129_0005084_11404_12363	62.600	7.636E-123	389	1.000%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300045994_000190\|3300045994\|Ga0485838_0000129_5989_6942	44.600	3.463E-73	246	0.958%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300009151_000394\|3300009151\|Ga0114962_1000107833	48.300	9.190E-82	271	0.961%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300010158_003374\|3300010158\|Ga0114960_100093828	48.200	2.355E-81	269	0.961%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300034167_000504\|3300034167\|Ga0335017_0000196_9082_10026	48.400	4.908E-82	271	0.961%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300034032_000009\|3300034032\|Ga0334954_000240_11733_12677	55.500	1.715E-102	331	0.994%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300032144_000009\|3300032144\|Ga0315910_1000021837	50.200	2.379E-87	287	0.974%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300039447_000016\|3300039447\|Ga0436361_0723982_2991_3938	57.000	7.338E-107	343	0.994%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300020049_005844\|3300020049\|Ga0206652_10140201	49.700	2.894E-80	266	0.916%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300020050_004647\|3300020050\|Ga0206642_100668912	50.400	1.143E-86	285	0.965%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300020036_002362\|3300020036\|Ga0206648_100075110	50.400	1.564E-86	284	0.965%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300037313_000411\|3300037313\|Ga0395908_0000267_19555_20502	51.400	1.144E-92	302	0.997%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300037312_000314\|3300037312\|Ga0395899_0000301_41890_42837	51.400	1.144E-92	302	0.997%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300037313_001071\|3300037313\|Ga0395908_0001117_24216_25184	46.400	3.192E-78	260	0.971%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300048834_000287\|3300048834\|Ga0498918_0008833_6705_7643	46.100	1.373E-76	256	0.974%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300025124_000163\|3300025124\|Ga0210058_10158413	50.000	2.145E-89	293	0.997%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1
IMGVR_UViG_3300003830_000159\|3300003830\|Ga0051980_1000851410	50.000	2.145E-89	293	0.997%	IMGVR	PF01068	phrog_24 phrog_16 phrog_239 phrog_3830 phrog_1