dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS243

Inhibited defense system

CLAN ID

CLAN014

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300037312_000536\|3300037312\|Ga0395899_0000236_64925_65458	gene_page:	177	19887.5	9.0657	6

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF25185

Phrog

phrog_4211,phrog_2229,phrog_2488,phrog_496,phrog_1314

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending type I Thoeris because it belongs to the same clan as family APIS351 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS243	IMGVR_UViG_3300037312_000536\|3300037312\|Ga0395899_0000236_64925_65458	3	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN014

APIS243 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300037312_000536\|3300037312\|Ga0395899_0000236_64925_65458	100.000	2.211E-121	377	1.000%	IMGVR	PF25185	phrog_4211 phrog_2229 phrog_2488 phrog_496 phrog_1314
IMGVR_UViG_3300037313_001418\|3300037313\|Ga0395908_0001773_3828_4373	58.800	2.252E-61	205	0.989%	IMGVR	PF25185	phrog_4211 phrog_2229 phrog_2488 phrog_496 phrog_1314
IMGVR_UViG_3300046794_000166\|3300046794\|Ga0495589_0002468_8153_8722	55.100	4.917E-56	189	0.989%	IMGVR	PF25185	phrog_4211 phrog_2229 phrog_2488 phrog_496 phrog_1314