No AFmodels/IMGVR_UViG_3300014205_004963|3300014205|Ga0172380_100250779-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS238
Inhibited defense system
CLAN ID CLAN016
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300014205_004963|3300014205|Ga0172380_100250779
gene_page: 160 17917.5 4.2956 -9
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF25188
Phrog phrog_5311,phrog_67,phrog_2885,phrog_3004,phrog_2713
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending type I Thoeris because it belongs to the same clan as family APIS240 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS238 IMGVR_UViG_3300014205_004963|3300014205|Ga0172380_100250779 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN016

APIS238 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300014205_004963|3300014205|Ga0172380_100250779 100.000 1.559E-112 351 1.000% IMGVR PF25188 phrog_5311 phrog_67 phrog_2885 phrog_3004 phrog_2713
IMGVR_UViG_3300025012_000003|3300025012|Ga0209727_1000031301 59.700 3.329E-56 189 0.981% IMGVR PF25188 phrog_5311 phrog_67 phrog_2885 phrog_3004 phrog_2713
IMGVR_UViG_3300024999_000041|3300024999|Ga0209728_1000032217 60.100 9.427E-57 190 0.981% IMGVR PF25188 phrog_5311 phrog_67 phrog_2885 phrog_3004 phrog_2713