dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS231

Inhibited defense system

CLAN ID

CLAN007

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300000405_000017\|3300000405\|LV_Brine_h2_0102DRAFT_10000645	gene_page:	249	29171.2	7.1858	1.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF25187

Phrog

phrog_991,phrog_202,phrog_2885,phrog_719,phrog_992

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending type III CBASS because it belongs to the same clan as family APIS369 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS231	IMGVR_UViG_3300000405_000017\|3300000405\|LV_Brine_h2_0102DRAFT_10000645	7	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN007

APIS231 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300000405_000017\|3300000405\|LV_Brine_h2_0102DRAFT_10000645	100.000	1.123E-177	544	1.000%	IMGVR	PF25187	phrog_991 phrog_202 phrog_2885 phrog_719 phrog_992
IMGVR_UViG_3300027994_000001\|3300027994\|Ga0247811_1000011209	66.600	2.399E-103	330	0.992%	IMGVR	PF25187	phrog_991 phrog_202 phrog_2885 phrog_719 phrog_992
IMGVR_UViG_3300013104_000002\|3300013104\|Ga0157370_10000028152	67.500	1.134E-105	336	0.996%	IMGVR	PF25187	phrog_991 phrog_202 phrog_2885 phrog_719 phrog_992
IMGVR_UViG_3300033068_001467\|3300033068\|Ga0364484_1161946	72.300	2.192E-115	364	0.996%	IMGVR	PF25187	phrog_991 phrog_202 phrog_2885 phrog_719 phrog_992
IMGVR_UViG_3300033068_001765\|3300033068\|Ga0364484_1037637	72.000	6.215E-116	366	0.996%	IMGVR	PF25187	phrog_991 phrog_202 phrog_2885 phrog_719 phrog_992
IMGVR_UViG_3300033984_000473\|3300033984\|Ga0334989_0000003_187289_188047	71.800	1.599E-115	365	0.996%	IMGVR	PF25187	phrog_991 phrog_202 phrog_2885 phrog_719 phrog_992
IMGVR_UViG_3300037346_000580\|3300037346\|Ga0400280_000035_99015_99773	69.800	2.036E-111	353	0.996%	IMGVR	PF25187	phrog_991 phrog_202 phrog_2885 phrog_719 phrog_992