dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS226

Inhibited defense system

CLAN ID

CLAN003

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300033146_000690\|3300033146\|Ga0366841_10263344	gene_page:	165	18462	9.537	4

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26760

Phrog

phrog_29,phrog_3333,phrog_2871,phrog_973,phrog_3222

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I Thoeris,Type II Thoeris because it belongs to the same clan as family APIS288,APIS359,LockinC which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS226	IMGVR_UViG_3300033146_000690\|3300033146\|Ga0366841_10263344	4	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN003

APIS226 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300033146_000690\|3300033146\|Ga0366841_10263344	100.000	1.301E-108	340	1.000%	IMGVR	PF26760	phrog_29 phrog_3333 phrog_2871 phrog_973 phrog_3222
IMGVR_UViG_3300033146_000697\|3300033146\|Ga0366841_100657914	50.800	3.079E-50	172	0.976%	IMGVR	PF26760	phrog_29 phrog_3333 phrog_2871 phrog_973 phrog_3222
IMGVR_UViG_3300033146_000451\|3300033146\|Ga0366841_10065568	50.200	3.079E-50	172	0.988%	IMGVR	PF26760	phrog_29 phrog_3333 phrog_2871 phrog_973 phrog_3222
IMGVR_UViG_3300033146_000423\|3300033146\|Ga0366841_100882313	46.400	4.775E-48	166	0.988%	IMGVR	PF26760	phrog_29 phrog_3333 phrog_2871 phrog_973 phrog_3222