dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS220

Inhibited defense system

CLAN ID

CLAN003

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300020037_002740\|3300020037\|Ga0206644_100027631	gene_page:	176	19376.1	8.2356	3

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26760

Phrog

phrog_1200,phrog_4492,phrog_196,phrog_2083,phrog_1698

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I Thoeris,Type II Thoeris because it belongs to the same clan as family APIS288,APIS359,LockinC which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS220	IMGVR_UViG_3300020037_002740\|3300020037\|Ga0206644_100027631	10	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN003

APIS220 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300020037_002740\|3300020037\|Ga0206644_100027631	100.000	5.619E-118	368	1.000%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300005664_000331\|3300005664\|Ga0073685_100053413	98.400	5.619E-118	368	1.000%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300013005_000034\|3300013005\|Ga0164292_1000005165	44.700	6.503E-40	143	0.926%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300037324_000043\|3300037324\|Ga0400257_000011_51994_52506	43.800	9.013E-37	134	0.955%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300022670_000308\|3300022670\|Ga0247391_100000299	42.800	7.347E-35	128	0.943%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300042268_000523\|3300042268\|Ga0451651_000375_18790_19350	40.300	3.160E-27	106	0.830%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300010330_000046\|3300010330\|Ga0136651_100015294	40.500	1.533E-32	121	0.949%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300022552_000092\|3300022552\|Ga0212118_100042211	40.500	1.533E-32	121	0.949%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300048629_000034\|3300048629\|Ga0496622_0000016_98378_98875	57.600	1.526E-35	130	0.631%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698
IMGVR_UViG_3300024273_000931\|3300024273\|Ga0260593_169679568	46.500	5.797E-42	149	0.972%	IMGVR	PF26760	phrog_1200 phrog_4492 phrog_196 phrog_2083 phrog_1698