dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS214

Inhibited defense system

CLAN ID

CLAN014

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300010357_000570\|3300010357\|Ga0116249_1000073248	gene_page:	194	22073.2	4.7374	-4.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF25185

Phrog

phrog_1506,phrog_6616,phrog_67,phrog_4372,phrog_2871

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending type I Thoeris because it belongs to the same clan as family APIS351 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS214	IMGVR_UViG_3300010357_000570\|3300010357\|Ga0116249_1000073248	12	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN014

APIS214 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300010357_000570\|3300010357\|Ga0116249_1000073248	100.000	3.450E-130	404	1.000%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300010355_000731\|3300010355\|Ga0116242_1000271646	98.000	6.484E-130	403	0.995%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300010346_000616\|3300010346\|Ga0116239_100047382	52.300	4.940E-61	205	0.985%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300048838_000104\|3300048838\|Ga0498922_0001441_24669_25283	53.200	1.920E-61	206	0.979%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300026290_000244\|3300026290\|Ga0209510_10020421	54.600	1.271E-60	203	0.938%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300036958_000152\|3300036958\|Ga0377216_001299_19125_19739	54.000	3.199E-63	211	0.985%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300042542_002695\|3300042542\|Ga0453075_0010578_3223_3843	49.200	7.038E-55	187	0.985%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300028027_000438\|3300028027\|Ga0247722_1000118713	51.900	2.163E-59	200	0.985%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300046313_000430\|3300046313\|Ga0456298_000072_31484_32092	53.200	3.605E-61	205	0.985%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300028559_000035\|3300028559\|Ga0247831_1000805125	53.700	2.631E-61	205	0.979%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300020036_001301\|3300020036\|Ga0206648_10002223	53.400	1.920E-61	206	0.985%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871
IMGVR_UViG_3300033066_001389\|3300033066\|Ga0364482_1144844	48.000	7.154E-52	178	0.959%	IMGVR	PF25185	phrog_1506 phrog_6616 phrog_67 phrog_4372 phrog_2871