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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna07700.1-v1.0-hybrid |
Family | AA2 |
Protein Properties | Length: 487 Molecular Weight: 54645.3 Isoelectric Point: 7.9132 |
Chromosome | Chromosome/Scaffold: Start: 8901991 End: 8907659 |
Description | Peroxidase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 65 | 318 | 7.69999e-41 |
HQDKSITPKLLRLLYSDCFVTGCDASVLLDGPNSEKTAPQNLGLGGFVFIDRIKRVLEQRCPGAVSCADLLNLATRDAVHLAGAPSYPVLTGRRDGLKSS RSSVDLPSPSISWQASLDYFKSRGLNVLDMTTLLGSHSMGKTHCRFILDRLYNFNGTNKPDPNMGPSFLSSMRKLCPPRTKKGQSDPLVYLNPQSGPSYS FTNSYYSRVLSKKSVLGIDQQLLLGEDTKDITDEFDAGLEDFRRSYAYSMSRMG |
Full Sequence |
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Protein Sequence Length: 487 Download |
MTRNQRIFVF LVVLPLLVSV CSSATPKAPP PPPKQNQLMW HFYKVTNTCR DAELYIRHQV 60 ELLWHQDKSI TPKLLRLLYS DCFVTGCDAS VLLDGPNSEK TAPQNLGLGG FVFIDRIKRV 120 LEQRCPGAVS CADLLNLATR DAVHLAGAPS YPVLTGRRDG LKSSRSSVDL PSPSISWQAS 180 LDYFKSRGLN VLDMTTLLGS HSMGKTHCRF ILDRLYNFNG TNKPDPNMGP SFLSSMRKLC 240 PPRTKKGQSD PLVYLNPQSG PSYSFTNSYY SRVLSKKSVL GIDQQLLLGE DTKDITDEFD 300 AGLEDFRRSY AYSMSRMGSI KVLTESEPAE FWSSIYLSRR HHSMHHMSSN EVETTVKLLG 360 QVWRSPGFEI AKWWKGNEAT YPVLSKLAKD IFSIPCSTVV SENAFSLGDR VVDPFRASLT 420 PRMVEALVCT SDWLRADTPS LYKDPTEEDL KFYYELEELE KENGYNQGVE AATLIEITRS 480 SGQTNM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 8.0e-12 | 56 | 219 | 181 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam05699 | Dimer_Tnp_hAT | 1.0e-21 | 364 | 430 | 67 | + hAT family dimerisation domain. This dimerisation domain is found at the C terminus of the transposases of elements belonging to the Activator superfamily (hAT element superfamily). The isolated dimerisation domain forms extremely stable dimers in vitro. | ||
pfam00141 | peroxidase | 3.0e-47 | 56 | 202 | 149 | + Peroxidase. | ||
PLN03030 | PLN03030 | 3.0e-60 | 42 | 327 | 293 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 2.0e-115 | 37 | 327 | 295 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0046983 | protein dimerization activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 37 | 327 | 2 | 293 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1pa2_A | 0 | 37 | 327 | 2 | 293 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1gw2_A | 0 | 37 | 327 | 1 | 294 | A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid |
PDB | 1qgj_B | 0 | 48 | 320 | 10 | 283 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1qgj_A | 0 | 48 | 320 | 10 | 283 | A Chain A, Arabidopsis Thaliana Peroxidase N |