y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A00045.1 |
Family | AA2 |
Protein Properties | Length: 338 Molecular Weight: 37281.6 Isoelectric Point: 8.7464 |
Chromosome | Chromosome/Scaffold: 1 Start: 444803 End: 446312 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 61 | 317 | 3.5e-38 |
YWKRDKSLAPKLIRMLYADCFVTGCDASILLDGPYSEKTAPQSAGFLGFPMVVIDKIKQILEERCPGVVSCADILNFAARDAAHLAGGPSYPVLAGRRDG MSSSAASVDLPLGAALWGSALAYFESRGLDVLDLTTLLGTGGHSMGKANCSFIADRLYNFNKTGKPDPSMDSSFLAQMREQCPPNSKNQVYLDPDSGSSY SFSKSFYSRVLNHRAVLGIDQQIGANNDSSQIAQQYDGSFEDFRKRFALSMSRMGNI |
Full Sequence |
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Protein Sequence Length: 338 Download |
MRASRWWLLL LLAFVVLVSS CAMLRVEAAV GIEPPQKLQW HYYRNSCRDA ERYVTSQVEF 60 YWKRDKSLAP KLIRMLYADC FVTGCDASIL LDGPYSEKTA PQSAGFLGFP MVVIDKIKQI 120 LEERCPGVVS CADILNFAAR DAAHLAGGPS YPVLAGRRDG MSSSAASVDL PLGAALWGSA 180 LAYFESRGLD VLDLTTLLGT GGHSMGKANC SFIADRLYNF NKTGKPDPSM DSSFLAQMRE 240 QCPPNSKNQV YLDPDSGSSY SFSKSFYSRV LNHRAVLGID QQIGANNDSS QIAQQYDGSF 300 EDFRKRFALS MSRMGNIKVL TGNQGEIRKN CRVVNRK* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 2.0e-6 | 54 | 173 | 130 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 2.0e-41 | 54 | 171 | 119 | + Peroxidase. | ||
PLN03030 | PLN03030 | 9.0e-60 | 42 | 335 | 300 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 2.0e-114 | 37 | 334 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN61767.1 | 0 | 1 | 335 | 25 | 363 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_181876.2 | 0 | 27 | 335 | 24 | 335 | peroxidase, putative [Arabidopsis thaliana] |
RefSeq | NP_197795.1 | 0 | 11 | 335 | 9 | 335 | peroxidase family protein [Arabidopsis thaliana] |
RefSeq | XP_002272039.1 | 0 | 1 | 335 | 1 | 339 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310424.1 | 0 | 6 | 335 | 9 | 336 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gw2_A | 0 | 37 | 335 | 1 | 305 | A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid |
PDB | 3atj_B | 0 | 37 | 335 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3atj_A | 0 | 37 | 335 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 1gwt_A | 0 | 37 | 335 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 4atj_B | 0 | 37 | 335 | 2 | 306 | A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |