y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_002721m |
Family | GT64 |
Protein Properties | Length: 703 Molecular Weight: 79770.3 Isoelectric Point: 9.3063 |
Chromosome | Chromosome/Scaffold: 11232 Start: 351816 End: 356579 |
Description | glycosyltransferase family protein 47 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT64 | 463 | 699 | 0 |
FTLLTMTYDARLWNLKMYVKHYSRCSSVKEIVVVWNKGTPPKLSDLDSVVPVRIRVEKKNSLNNRFRKDDLIKTRAVLELDDDILMTCNDIERGFNVWRQ HPDRIVGYYPRLISGTPLKYRGEKYARKHKGYNMILTGASFLDSKLAFEMYWGEEAKVGREMVDIHFNCEDVLLNYLYANASRSSTVEYVRPTWAIDTSK FSGAAISRDTQGHYKIRSNCLKKFSEIYGSLSHRKSE |
Full Sequence |
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Protein Sequence Length: 703 Download |
MVYGWLMFNK PYVGAGGVVG LNSVGCQEDN EGSWSIGLFY GDSPFSLKPI ETMNFWKNES 60 AAWPVANPVI TCASVSDSGF ASNFVADPFL YVQGDTLYLF YETKNSITMQ GDIGVAKSTD 120 NGASWQQLGI ALDEEWHLSY PYVFNHLDKI YMMPEGSSKG ELRLYRAVNF PLQWTLEKIL 180 MKKPLVDSFI IKHDGEYWLF GSDHSGFGTK KNGQLEIWHS NSPLGPWKPH KKNPIYNIDR 240 SLGARNGGRP FLYKGNLYRI GQDCGETYGH RVRVFKVEVL TKDDYKEVEV SMDFEEPKKG 300 RNAWNGARYH HLDVQQLSSG KWIGVMDGDR VPSGDLVHRF FIGCASLAAV AAIVVVLGLL 360 LGAVKCIIPL NWCAYYLGKR SDTLLVWERS NAFSSKVRRF CGRLNRAASS LRTKIRLNTW 420 AGRLVLAAIF TVGIALTFTS IKYIYAGNGA EEPYPLKGSY SQFTLLTMTY DARLWNLKMY 480 VKHYSRCSSV KEIVVVWNKG TPPKLSDLDS VVPVRIRVEK KNSLNNRFRK DDLIKTRAVL 540 ELDDDILMTC NDIERGFNVW RQHPDRIVGY YPRLISGTPL KYRGEKYARK HKGYNMILTG 600 ASFLDSKLAF EMYWGEEAKV GREMVDIHFN CEDVLLNYLY ANASRSSTVE YVRPTWAIDT 660 SKFSGAAISR DTQGHYKIRS NCLKKFSEIY GSLSHRKSEF DQ* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd08994 | GH43_like_2 | 0.0001 | 188 | 273 | 88 | + Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. | ||
cd08978 | GH_F | 4.0e-5 | 63 | 236 | 189 | + Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. GH62 are also predicted to be inverting enzymes. A common structural feature of both, GH43 and GH62 enzymes, is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. | ||
pfam09258 | Glyco_transf_64 | 2.0e-73 | 463 | 700 | 240 | + Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. |
Gene Ontology | |
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GO Term | Description |
GO:0009496 | plastoquinol--plastocyanin reductase activity |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0031227 | intrinsic to endoplasmic reticulum membrane |
GO:0042651 | thylakoid membrane |
GO:0051537 | 2 iron, 2 sulfur cluster binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB85556.1 | 0 | 2 | 700 | 56 | 755 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_196070.2 | 0 | 2 | 700 | 57 | 756 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
RefSeq | XP_002262646.1 | 0 | 21 | 701 | 68 | 748 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315348.1 | 0 | 9 | 701 | 84 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532924.1 | 0 | 7 | 702 | 1 | 697 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1on8_B | 6e-25 | 455 | 698 | 22 | 275 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1on8_A | 6e-25 | 455 | 698 | 22 | 275 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1on6_B | 6e-25 | 455 | 698 | 22 | 275 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1on6_A | 6e-25 | 455 | 698 | 22 | 275 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1omz_B | 6e-25 | 455 | 698 | 22 | 275 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |