y
Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s78_207V6.2 |
Family | GT8 |
Protein Properties | Length: 472 Molecular Weight: 54012.1 Isoelectric Point: 6.5616 |
Chromosome | Chromosome/Scaffold: 78 Start: 1424695 End: 1427963 |
Description | galacturonosyltransferase-like 10 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 131 | 429 | 0 |
LKKASEQVVHIFVSTDGADFRPLAVLVNSTISNAVHPERLHFHLVLPASHHSRAKHLAAFFQDTKIDIVSENIDFKDMEKHITFRKNSKARPELQSVYNF APFLLPLHFKDVGRFIYLDADIVVKGNIEELIQIDLGNRAAAAVEDCSQTFETYFDFNELAKIQARPEKPTWVPTEPIKPDACVFNRGVLVIDTNQWIKQ QVTEAILWWMDEFQSAESVLYKYGLSQPPFLLALYGKYMKLDTPWNVRGLGRNEFSEREREFLESKYGHKPERKPFISLDADTAKILHFNGKFKPWKQT |
Full Sequence |
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Protein Sequence Length: 472 Download |
MADYQPHSSL AMRRPQRPYS DEEATRTRTI RADLEPAPQP WPGLTYVALF LLCGFVALQM 60 YPSTHWRHPQ DRTKTWIPHD RTETDQASST DPFYSSLSEE QGQQAQDLAS QGTVSNLSND 120 EKHDEYTLAF LKKASEQVVH IFVSTDGADF RPLAVLVNST ISNAVHPERL HFHLVLPASH 180 HSRAKHLAAF FQDTKIDIVS ENIDFKDMEK HITFRKNSKA RPELQSVYNF APFLLPLHFK 240 DVGRFIYLDA DIVVKGNIEE LIQIDLGNRA AAAVEDCSQT FETYFDFNEL AKIQARPEKP 300 TWVPTEPIKP DACVFNRGVL VIDTNQWIKQ QVTEAILWWM DEFQSAESVL YKYGLSQPPF 360 LLALYGKYMK LDTPWNVRGL GRNEFSERER EFLESKYGHK PERKPFISLD ADTAKILHFN 420 GKFKPWKQTR PVGPSSNVVS RCGSKGIECA KLWWEYLSPV ADGILRHDDA L* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 6.0e-20 | 154 | 426 | 303 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 4.0e-24 | 154 | 426 | 306 | + Probable galacturonosyltransferase | ||
cd04194 | GT8_A4GalT_like | 4.0e-28 | 139 | 427 | 302 | + A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS. | ||
pfam01501 | Glyco_transf_8 | 2.0e-39 | 140 | 427 | 288 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd06429 | GT8_like_1 | 6.0e-86 | 139 | 458 | 336 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25803.1 | 2e-37 | 139 | 466 | 106 | 377 | unknown [Picea sitchensis] |
RefSeq | XP_001753623.1 | 0 | 11 | 466 | 26 | 556 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001757823.1 | 0 | 208 | 471 | 1 | 264 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001760713.1 | 0 | 139 | 452 | 410 | 769 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001765660.1 | 0 | 4 | 471 | 60 | 527 | predicted protein [Physcomitrella patens subsp. patens] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC422492 | 270 | 3 | 272 | 0 |
BY977339 | 194 | 3 | 196 | 0 |
CJ971108 | 182 | 1 | 182 | 0 |
BY982128 | 175 | 3 | 177 | 0 |
DC905509 | 160 | 3 | 162 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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