y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra030163 |
Family | GT8 |
Protein Properties | Length: 353 Molecular Weight: 39693.4 Isoelectric Point: 8.7063 |
Chromosome | Chromosome/Scaffold: 07 Start: 6070240 End: 6071414 |
Description | galacturonosyltransferase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 73 | 329 | 5.60519e-45 |
VHVAITLDVTYLRGSIAAVNSILQHSLCPESVFFHFIVSSETNLESLVRSTFQELKFNVYYFAPETVRGLISSSVRQALEQPLNYARNYLAELLEGCVNR VIYLDSDLVVVDDIVKLWKTGLGSRVIGAPEYCHANFTKYFTGGFWAEERFSGTFRGRRRACYFNTGVMVIDLKKWRRGAYTRRIEKWMEIQRTERIYEL GSLPPFLLVFAGHVAPISHRWNQHGLGGDNVRGSCRDLHPGPVSLLHWSGSGKPWLR |
Full Sequence |
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Protein Sequence Length: 353 Download |
MLWITRLSAF FSAAMAVIVL SPSLQSFPPA AAIHSSDRSL ISSFRNSPPF RNAADECLSS 60 SAADSNVCNP SLVHVAITLD VTYLRGSIAA VNSILQHSLC PESVFFHFIV SSETNLESLV 120 RSTFQELKFN VYYFAPETVR GLISSSVRQA LEQPLNYARN YLAELLEGCV NRVIYLDSDL 180 VVVDDIVKLW KTGLGSRVIG APEYCHANFT KYFTGGFWAE ERFSGTFRGR RRACYFNTGV 240 MVIDLKKWRR GAYTRRIEKW MEIQRTERIY ELGSLPPFLL VFAGHVAPIS HRWNQHGLGG 300 DNVRGSCRDL HPGPVSLLHW SGSGKPWLRL DSKRPCPLDA LWTPYDLYLH TH* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 2.0e-15 | 155 | 330 | 176 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 2.0e-17 | 66 | 328 | 287 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 5.0e-18 | 65 | 345 | 330 | + Probable galacturonosyltransferase | ||
cd06429 | GT8_like_1 | 1.0e-28 | 73 | 345 | 296 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
pfam01501 | Glyco_transf_8 | 5.0e-54 | 74 | 331 | 261 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM13982.1 | 0 | 1 | 319 | 1 | 313 | putative glycosyl transferase [Arabidopsis thaliana] |
GenBank | AAM63375.1 | 0 | 1 | 352 | 1 | 346 | putative glycosyl transferase [Arabidopsis thaliana] |
EMBL | CAB83116.1 | 0 | 6 | 350 | 2 | 354 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_171772.1 | 0 | 1 | 352 | 1 | 361 | GATL5 (GALACTURONOSYLTRANSFERASE 5); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_192122.1 | 0 | 1 | 352 | 1 | 346 | GATL6; polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.0000000002 | 157 | 329 | 84 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.000000002 | 157 | 329 | 84 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.000000002 | 157 | 329 | 84 | 254 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |