y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os04g44850.1 |
Family | GT8 |
Protein Properties | Length: 342 Molecular Weight: 37401 Isoelectric Point: 8.5657 |
Chromosome | Chromosome/Scaffold: 4 Start: 26552974 End: 26554891 |
Description | galacturonosyltransferase-like 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 43 | 308 | 8.12753e-44 |
IHIAMTLDTTYLRGSLAGVLSVLRHAACPESIAFHFVASSASPARRLAALRRALAAAFPTLPATVHRFDARLVRGKISTSVRRALDQPLNYARIYLADLL PRSVSRVLYLDSDLLVVDDVARLWATDLGPDAALAAPEYCHANFTSYFTDAFWSHPEYSSIFTNRGRAPCYFNTGVMVIDLDRWRAGGYTVKLEYWMEVQ KQEARIYELGSLPPFLLVFAGEVKAVEHRWNQHGLGGDNVAGQCRELHPGPVSLLHWSGKGKPWLR |
Full Sequence |
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Protein Sequence Length: 342 Download |
MRVLAVALLA AAVLAAEAAA ELPEFREAPA FRNGAGCAGA PTIHIAMTLD TTYLRGSLAG 60 VLSVLRHAAC PESIAFHFVA SSASPARRLA ALRRALAAAF PTLPATVHRF DARLVRGKIS 120 TSVRRALDQP LNYARIYLAD LLPRSVSRVL YLDSDLLVVD DVARLWATDL GPDAALAAPE 180 YCHANFTSYF TDAFWSHPEY SSIFTNRGRA PCYFNTGVMV IDLDRWRAGG YTVKLEYWME 240 VQKQEARIYE LGSLPPFLLV FAGEVKAVEH RWNQHGLGGD NVAGQCRELH PGPVSLLHWS 300 GKGKPWLRLD AGRPCPLDAL WAPYDLLRRR GARDDLLAAV A* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04194 | GT8_A4GalT_like | 3.0e-13 | 43 | 306 | 272 | + A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS. | ||
PLN02867 | PLN02867 | 1.0e-13 | 131 | 324 | 202 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-14 | 131 | 324 | 195 | + Probable galacturonosyltransferase | ||
cd06429 | GT8_like_1 | 4.0e-23 | 43 | 309 | 281 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. | ||
pfam01501 | Glyco_transf_8 | 6.0e-46 | 44 | 310 | 267 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. |
Gene Ontology | |
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GO Term | Description |
GO:0005794 | Golgi apparatus |
GO:0005975 | carbohydrate metabolic process |
GO:0009058 | biosynthetic process |
GO:0016740 | transferase activity |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACR34301.1 | 0 | 1 | 341 | 1 | 297 | unknown [Zea mays] |
GenBank | EEE61391.1 | 0 | 23 | 341 | 23 | 316 | hypothetical protein OsJ_15564 [Oryza sativa Japonica Group] |
RefSeq | NP_001053393.1 | 0 | 1 | 341 | 1 | 341 | Os04g0530900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142255.1 | 0 | 1 | 341 | 1 | 342 | hypothetical protein LOC100274424 [Zea mays] |
RefSeq | XP_002446838.1 | 0 | 1 | 341 | 1 | 342 | hypothetical protein SORBIDRAFT_06g023460 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.0000001 | 133 | 308 | 84 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0000002 | 133 | 308 | 84 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0000002 | 133 | 308 | 84 | 254 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |