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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G075700.4 |
Family | GT41 |
Protein Properties | Length: 711 Molecular Weight: 79593.5 Isoelectric Point: 6.504 |
Chromosome | Chromosome/Scaffold: 16 Start: 5705307 End: 5715070 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT41 | 178 | 671 | 0 |
QGKMDAAASMIEKAIMANPTYAEAYNNLGVLYRDAGNISMAISAYEQCLEIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGRRFMRLYPQYTSWDN PKVPDRPLVIGYVSPDYFTHSVSYFIEAPLVYHVYANYKVVVYSAVVKPDAKTNRFKEKVLKRGGIWRDIYGIDEKKVAIMVREDKVDILVELTGHTANN KLGMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSFADPPDTKQKHVEELIRLPECFLCYIPSPEAGPVAPTPALSNGFITFGSFNNLAKITPKVLQVWA RILCAVPNSRLVVKCKPFCCDSVRQRFLTMLEQLGLEPLHVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGAVHAHNVGAS LLSNVGLGHLVAKNEEEYVQSALQLASDIAALSNLRMSLRDLMSKSPVCDGPNFTLGLETTYRNMWHRYCKGDVPSLRRIELLQQQEVPKEVPI |
Full Sequence |
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Protein Sequence Length: 711 Download |
MMQYDTALSC YEKAAMERPM YAEAYCNMGV IYKNRGDLES AIACYERCLA VSPNFEIAKN 60 NMAIALTDFG TKVKLEGDIS QGVAYYKKAL YYNWHYADAM YNLGVAYGEM LKFEMAIVFY 120 ELAFNFNPHC AEACNNLGVI YKDRDNLDKA VECYQLALSI KPNFSQSLNN LGVVYTVQGK 180 MDAAASMIEK AIMANPTYAE AYNNLGVLYR DAGNISMAIS AYEQCLEIDP DSRNAGQNRL 240 LAMNYINEGH DDKLFEAHRD WGRRFMRLYP QYTSWDNPKV PDRPLVIGYV SPDYFTHSVS 300 YFIEAPLVYH VYANYKVVVY SAVVKPDAKT NRFKEKVLKR GGIWRDIYGI DEKKVAIMVR 360 EDKVDILVEL TGHTANNKLG MMACRPAPVQ VTWIGYPNTT GLPTIDYRIT DSFADPPDTK 420 QKHVEELIRL PECFLCYIPS PEAGPVAPTP ALSNGFITFG SFNNLAKITP KVLQVWARIL 480 CAVPNSRLVV KCKPFCCDSV RQRFLTMLEQ LGLEPLHVDL LPLILLNHDH MQAYSLMDIS 540 LDTFPYAGTT TTCESLYMGV PCVTMAGAVH AHNVGASLLS NVGLGHLVAK NEEEYVQSAL 600 QLASDIAALS NLRMSLRDLM SKSPVCDGPN FTLGLETTYR NMWHRYCKGD VPSLRRIELL 660 QQQEVPKEVP IKNTDSTRIT SSRDGPPESI KANGFSAVSL PKVDHTINLG * 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0457 | NrfG | 5.0e-13 | 56 | 257 | 210 | + FOG: TPR repeat [General function prediction only] | ||
pfam13844 | Glyco_transf_41 | 2.0e-18 | 285 | 434 | 151 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
pfam13844 | Glyco_transf_41 | 3.0e-22 | 457 | 643 | 187 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
COG0457 | NrfG | 6.0e-23 | 1 | 248 | 255 | + FOG: TPR repeat [General function prediction only] | ||
COG3914 | Spy | 2.0e-90 | 114 | 646 | 580 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002308458.1 | 0 | 1 | 706 | 204 | 916 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002308458.1 | 3e-36 | 7 | 259 | 101 | 358 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323412.1 | 0 | 1 | 710 | 204 | 917 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323412.1 | 2e-35 | 7 | 273 | 101 | 372 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323412.1 | 0.000000000003 | 69 | 243 | 54 | 269 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4gz6_D | 7e-40 | 19 | 435 | 6 | 386 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 4gz6_D | 1e-22 | 457 | 652 | 524 | 715 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 4gz6_D | 0.00000003 | 7 | 128 | 62 | 185 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 4gz6_D | 0.00000007 | 5 | 138 | 26 | 152 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 4gz6_D | 0.00002 | 1 | 74 | 90 | 169 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY295408 | 400 | 227 | 624 | 0 |
GT041789 | 337 | 142 | 478 | 0 |
GT041789 | 73 | 5 | 75 | 0.000001 |
GT041789 | 125 | 33 | 155 | 0.000003 |
GT041789 | 107 | 78 | 182 | 0.00002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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