y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G208900.2 |
Family | GT41 |
Protein Properties | Length: 917 Molecular Weight: 101764 Isoelectric Point: 5.7334 |
Chromosome | Chromosome/Scaffold: 06 Start: 22400747 End: 22412967 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT41 | 365 | 834 | 0 |
PNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMANPTYAEAYNNLGVLYRDVGNITMAISAYEQCLEIDPDSRNAGQNRLLAMNYINEGHDDKLFQAHREW GRRFMRLYPQFTSWDNPKVPERPLVIGYVSPDYFTHSVSYFIEAPLVYHDYANYMVVVYSAVVKSDAKTNRFREKVASMIREDKVDILVELTGHTANNKL GMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSFTDPPHTKQKHVEELVRLPECFLCYIPSPEAGPVTPTPALSNGFITFGSFNNLAKITPKVLQVWARI LCAVPNSRLVVKCKPFGCDSVRQRFLTVLEQLGLEPLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCITMAGAVHAHNVGVSLL SKVGLGHLVAKNEEEYVQLALQLASDISALSNLRMSLRELMSKSPVCDGPNFTLGLETTYRNMWHRYCKG |
Full Sequence |
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Protein Sequence Length: 917 Download |
MAWTENDAGN VREKEPTGDN GFLKGSQPSP DPSGSRVGSS PAQKGFDGKD ALSYANILRS 60 RNKFADALAL YESALENDSG NVEAYIGKGI CLQMQNMERL AFDSFAEAIK LDPENACALT 120 HCGILYKDEG RLLEAAESYH KALKADPSYK PASECLAIVL TDLGTSLKLS GNTQEGIQKY 180 YDALKVDPHY APAYYNLGVV YSEMMQYDTA LSCYEKAAIE RPMYAEAYCN MGVIYKNRGD 240 LESAIACYER CLAVSPNFEI AKNNMAIALT DLGTKVKLEG DINQGVTYYK KALYYNWHYA 300 DAMYNLGVAY GEMLKFEMAI VFYELAFHFN PHCAEACNNL GVIYKDRDNL DKAVECYQLA 360 LSIKPNFSQS LNNLGVVYTV QGKMDAAASM IEKAIMANPT YAEAYNNLGV LYRDVGNITM 420 AISAYEQCLE IDPDSRNAGQ NRLLAMNYIN EGHDDKLFQA HREWGRRFMR LYPQFTSWDN 480 PKVPERPLVI GYVSPDYFTH SVSYFIEAPL VYHDYANYMV VVYSAVVKSD AKTNRFREKV 540 ASMIREDKVD ILVELTGHTA NNKLGMMACR PAPVQVTWIG YPNTTGLPTI DYRITDSFTD 600 PPHTKQKHVE ELVRLPECFL CYIPSPEAGP VTPTPALSNG FITFGSFNNL AKITPKVLQV 660 WARILCAVPN SRLVVKCKPF GCDSVRQRFL TVLEQLGLEP LRVDLLPLIL LNHDHMQAYS 720 LMDISLDTFP YAGTTTTCES LYMGVPCITM AGAVHAHNVG VSLLSKVGLG HLVAKNEEEY 780 VQLALQLASD ISALSNLRMS LRELMSKSPV CDGPNFTLGL ETTYRNMWHR YCKGDVPSLR 840 RIELLQQQGI PEDVPIKNSD STTITLSRDG PPESRDGLPE SVKANGFSAV SPPTVNHSCG 900 ENRSQVNNTI NSGKLS* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0457 | NrfG | 2.0e-20 | 42 | 257 | 220 | + FOG: TPR repeat [General function prediction only] | ||
COG0457 | NrfG | 5.0e-23 | 177 | 451 | 283 | + FOG: TPR repeat [General function prediction only] | ||
COG3914 | Spy | 5.0e-88 | 319 | 831 | 556 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | O82039 | 0 | 1 | 916 | 1 | 932 | SPY_PETHY RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=PhSPY |
RefSeq | XP_002281883.1 | 0 | 1 | 901 | 1 | 909 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308458.1 | 0 | 1 | 916 | 1 | 934 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323412.1 | 0 | 1 | 898 | 1 | 913 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530535.1 | 0 | 1 | 916 | 1 | 930 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1w3b_B | 2e-36 | 90 | 409 | 42 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 1w3b_B | 8e-31 | 110 | 441 | 27 | 344 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 1w3b_B | 1e-28 | 56 | 375 | 75 | 380 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 1w3b_B | 9e-19 | 56 | 313 | 143 | 386 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
PDB | 1w3b_B | 0.000000000003 | 52 | 240 | 207 | 388 | A Chain A, The Superhelical Tpr Domain Of O-linked Glcnac Transferase Reveals Structural Similarities To Importin Alpha. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY295408 | 401 | 430 | 809 | 0 |
GO867600 | 327 | 321 | 629 | 0 |
GO867600 | 119 | 162 | 278 | 0.00000000000007 |
GO867600 | 140 | 248 | 385 | 0.000001 |
GO867600 | 136 | 57 | 190 | 0.043 |
Sequence Alignments (This image is cropped. Click for full image.) |
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