y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G188200.2 |
Family | CBM45 |
Protein Properties | Length: 600 Molecular Weight: 68072.9 Isoelectric Point: 9.8389 |
Chromosome | Chromosome/Scaffold: 08 Start: 13012573 End: 13016783 |
Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM45 | 126 | 201 | 9.9e-22 |
LHWGAILDRKEKWVLPSRQPNGTTNYKNRALRSPFIKSGSNSYISIAIDDPATQAIEFLVVDEAKNKWFKDNGQNF |
Full Sequence |
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Protein Sequence Length: 600 Download |
MSNSNIWHHK LFHYQSLLRP ASLEHRSKLD SSGIVAKYLF KAARRSSSFS GNDLKLRRSE 60 SGIGGSRRSV IFTPRAVLAM EPSSELAGKF NLDGNIEMQV FVSNSSAASI AQINIQITYS 120 SDSLLLHWGA ILDRKEKWVL PSRQPNGTTN YKNRALRSPF IKSGSNSYIS IAIDDPATQA 180 IEFLVVDEAK NKWFKDNGQN FHIKLPMREK LIIPNVSVPE ELVQIQAYLR WERKGKQMYT 240 PEQEKEEYES ARFELLEEVA RGTSIEDLRA KLTNKNDRCE IKEPSVSKIK NRIPDDLVQI 300 QAYIRWEKAG KPNYSPEQQL REFEKAREEL QTELYKGVSI DEIQKKITKG EIKTEESKQL 360 QNKRYFSNER IQRKKWDIMQ LVNKHAAKSV EDKVSKSAEG KASVESKVLK AVELFAKKKE 420 EHDGGAVLNK KIFKLADKEL LVLVTKPGGK VKVHLATDLE QPVTLHWALS KKAGEWLEPP 480 PNVLPPGSIS LQVAAETQLK NESSTEFSYQ VQSFEMEIEK DTFIGMPFVL LSNGRWIKNN 540 GSDFYIEFGR GSKHVQKDAG DGIGTARALL DKIAKMESEA QKSFMHRSVK CLCIHIFSC* 600 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02784 | PLN02784 | 0.001 | 123 | 206 | 92 | + alpha-amylase | ||
PLN02784 | PLN02784 | 6.0e-6 | 124 | 206 | 86 | + alpha-amylase | ||
PLN02784 | PLN02784 | 2.0e-7 | 411 | 583 | 185 | + alpha-amylase | ||
PLN02784 | PLN02784 | 1.0e-9 | 448 | 567 | 123 | + alpha-amylase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK11735.1 | 0 | 14 | 587 | 11 | 580 | starch associated protein R1 [Solanum tuberosum] |
Swiss-Prot | Q8LPT9 | 0 | 1 | 587 | 1 | 588 | GWD1_CITRE RecName: Full=Alpha-glucan water dikinase, chloroplastic; AltName: Full=Starch-related protein R1; Flags: Precursor |
RefSeq | XP_002270485.1 | 0 | 4 | 587 | 2 | 584 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315679.1 | 0 | 1 | 587 | 1 | 593 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527902.1 | 0 | 4 | 587 | 2 | 584 | alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation II | RXN-12203 | EC-2.7.9.4 | α-glucan, water dikinase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779957 | 364 | 194 | 557 | 0 |
HO800258 | 339 | 24 | 362 | 0 |
HO779957 | 74 | 269 | 340 | 0.00000002 |
HO779957 | 112 | 118 | 220 | 0.00007 |
HO779957 | 31 | 557 | 587 | 0.0004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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