y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G182600.7 |
Family | CBM45 |
Protein Properties | Length: 354 Molecular Weight: 39522.2 Isoelectric Point: 8.0631 |
Chromosome | Chromosome/Scaffold: 08 Start: 46049816 End: 46052878 |
Description | alpha-amylase-like 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM45 | 125 | 208 | 1.2e-27 |
LHWGVSYLGDSGSEWDQPPKGMRPPGSIPIKDYAIETPLKKLSEGDIFHEVKIDFNPISEIAAIHFVLKDEETGAWYQHRGMDF |
Full Sequence |
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Protein Sequence Length: 354 Download |
MAAVTIDSLL QNPTLLFRPK AKVLLKPPRS LDCSRNRKLP LSRGSCLCSF NPRRTIHVVR 60 ASSSETALIG NFDISSSDDI LYKDIFPVKR IEKVEGKFFI RLDRSKDQHD WQFTVGCSLP 120 GKWILHWGVS YLGDSGSEWD QPPKGMRPPG SIPIKDYAIE TPLKKLSEGD IFHEVKIDFN 180 PISEIAAIHF VLKDEETGAW YQHRGMDFKV PLVDYLEDDG NIVGAKRGFG VWSGALQQFS 240 NVLLKSEASH ADSQNNSIES KDSKNKNRCL EGFYEEQSIV KEVSVGNLVS VAVRKSPETG 300 KVVVCLETDI PGDVVVHWGV CRDDAKIWKI PAAPYPPETT VFKNKALRTL LQV* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02784 | PLN02784 | 1.0e-8 | 119 | 212 | 94 | + alpha-amylase | ||
PLN02784 | PLN02784 | 6.0e-135 | 1 | 352 | 354 | + alpha-amylase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33231.1 | 0 | 1 | 352 | 1 | 353 | plastid alpha-amylase [Malus x domestica] |
GenBank | AAX33233.1 | 0 | 40 | 351 | 38 | 347 | plastid alpha-amylase [Actinidia chinensis] |
EMBL | CAN69906.1 | 0 | 1 | 352 | 1 | 341 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002520134.1 | 0 | 6 | 352 | 1 | 349 | alpha-amylase, putative [Ricinus communis] |
RefSeq | XP_002520134.1 | 0.006 | 119 | 212 | 307 | 393 | alpha-amylase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES849521 | 224 | 129 | 352 | 0 |
EG631183 | 363 | 1 | 352 | 0 |
EG688633 | 250 | 94 | 342 | 0 |
HO782468 | 236 | 90 | 322 | 0 |
HO782468 | 30 | 323 | 352 | 0.005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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