y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G188200.1 |
Family | CBM45 |
Protein Properties | Length: 601 Molecular Weight: 68201 Isoelectric Point: 9.8389 |
Chromosome | Chromosome/Scaffold: 08 Start: 13012573 End: 13016783 |
Description | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM45 | 127 | 202 | 9.9e-22 |
LHWGAILDRKEKWVLPSRQPNGTTNYKNRALRSPFIKSGSNSYISIAIDDPATQAIEFLVVDEAKNKWFKDNGQNF |
Full Sequence |
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Protein Sequence Length: 601 Download |
MSNSNIWHHK LFHYQSLLRP ASLEHRSKLD SSGIVAKYLF KAARRSSSFS GNDLKLRRSE 60 SGIGGSRRSV IFTPRAVLAM EPSSEQLAGK FNLDGNIEMQ VFVSNSSAAS IAQINIQITY 120 SSDSLLLHWG AILDRKEKWV LPSRQPNGTT NYKNRALRSP FIKSGSNSYI SIAIDDPATQ 180 AIEFLVVDEA KNKWFKDNGQ NFHIKLPMRE KLIIPNVSVP EELVQIQAYL RWERKGKQMY 240 TPEQEKEEYE SARFELLEEV ARGTSIEDLR AKLTNKNDRC EIKEPSVSKI KNRIPDDLVQ 300 IQAYIRWEKA GKPNYSPEQQ LREFEKAREE LQTELYKGVS IDEIQKKITK GEIKTEESKQ 360 LQNKRYFSNE RIQRKKWDIM QLVNKHAAKS VEDKVSKSAE GKASVESKVL KAVELFAKKK 420 EEHDGGAVLN KKIFKLADKE LLVLVTKPGG KVKVHLATDL EQPVTLHWAL SKKAGEWLEP 480 PPNVLPPGSI SLQVAAETQL KNESSTEFSY QVQSFEMEIE KDTFIGMPFV LLSNGRWIKN 540 NGSDFYIEFG RGSKHVQKDA GDGIGTARAL LDKIAKMESE AQKSFMHRSV KCLCIHIFSC 600 * 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02784 | PLN02784 | 0.001 | 124 | 207 | 92 | + alpha-amylase | ||
PLN02784 | PLN02784 | 6.0e-6 | 125 | 207 | 86 | + alpha-amylase | ||
PLN02784 | PLN02784 | 2.0e-7 | 412 | 584 | 185 | + alpha-amylase | ||
PLN02784 | PLN02784 | 1.0e-9 | 449 | 568 | 123 | + alpha-amylase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK11735.1 | 0 | 14 | 588 | 11 | 580 | starch associated protein R1 [Solanum tuberosum] |
Swiss-Prot | Q8LPT9 | 0 | 1 | 588 | 1 | 588 | GWD1_CITRE RecName: Full=Alpha-glucan water dikinase, chloroplastic; AltName: Full=Starch-related protein R1; Flags: Precursor |
RefSeq | XP_002270485.1 | 0 | 4 | 588 | 2 | 584 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315679.1 | 0 | 1 | 588 | 1 | 593 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527902.1 | 0 | 4 | 588 | 2 | 584 | alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation II | RXN-12203 | EC-2.7.9.4 | α-glucan, water dikinase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779957 | 364 | 195 | 558 | 0 |
HO800258 | 340 | 24 | 363 | 0 |
HO779957 | 74 | 270 | 341 | 0.00000002 |
HO779957 | 112 | 119 | 221 | 0.00007 |
HO779957 | 31 | 558 | 588 | 0.0004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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