y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00069371m |
Family | CBM20 |
Protein Properties | Length: 669 Molecular Weight: 76397.9 Isoelectric Point: 6.2198 |
Chromosome | Chromosome/Scaffold: 008571 Start: 6120 End: 10311 |
Description | disproportionating enzyme 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM20 | 17 | 105 | 3.4e-24 |
TLLFKLPYYTQWGQSLLITGSEPALGSWNVKQGLSLSPVHQDNELIWCGKVSVAAAFTCKYKYYVVDDNKNVLRWEAGENRKLVLPSGV | |||
GH77 | 297 | 611 | 0 |
VPVFSIRSDEDLGVGEFLDLKLLVDWAVNSGFHLVQLLPINDTSVNGMWWDSYPYSSLSVFALHPLYLRVQALSDAIPADVKEEIQQAKKQLDKKDVDYE ATLSSKLSIARKIFNLEKDKVLNSSSFKQFLSENEEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEKLEKLISEGTLHHDVIRFHYYVQYHLYMQLSD AAAYARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWEL PDHAATGLLGKFRPS |
Full Sequence |
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Protein Sequence Length: 669 Download |
MASSGPTSGK KSLNTVTLLF KLPYYTQWGQ SLLITGSEPA LGSWNVKQGL SLSPVHQDNE 60 LIWCGKVSVA AAFTCKYKYY VVDDNKNVLR WEAGENRKLV LPSGVQEGDI IEIRDWWQDA 120 SEALFLRSAF KNVVFNATEG VKKESQSASL NKSLDPEDIV VQFVISCPRL ESGSTVVVTG 180 SNPQLGRWQA QDGLKLSYVG DSLWKAICVL RKSEFPVKYP FAIVSPYFLL DVPYLVVLNI 240 FSTYKYCQIS QAGNSSLELG PNREVDIDLS SPKQSRYVVL SDGALRDEPW RGAGVAVPVF 300 SIRSDEDLGV GEFLDLKLLV DWAVNSGFHL VQLLPINDTS VNGMWWDSYP YSSLSVFALH 360 PLYLRVQALS DAIPADVKEE IQQAKKQLDK KDVDYEATLS SKLSIARKIF NLEKDKVLNS 420 SSFKQFLSEN EEWLKPYAAF CFLRDFFETS DHSQWGRFSQ FSKEKLEKLI SEGTLHHDVI 480 RFHYYVQYHL YMQLSDAAAY ARKKKVILKG DLPIGVDRNS VDTWVYPTLF RMNTATGAPP 540 DYFDKNGQNW GFPTYNWEEM SKDNYGWWRA RLTQMAKYFT AYRIDHILGF FRIWELPDHA 600 ATGLLGKFRP SIPLSQEEFL SEGLWDFNRM SRPYIRQEIL EEKFGSFWTV IAANFLNEYQ 660 KQCYEAMQ* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1640 | MalQ | 1.0e-73 | 294 | 598 | 308 | + 4-alpha-glucanotransferase [Carbohydrate transport and metabolism] | ||
PRK14508 | PRK14508 | 2.0e-75 | 291 | 611 | 330 | + 4-alpha-glucanotransferase; Provisional | ||
pfam02446 | Glyco_hydro_77 | 2.0e-117 | 297 | 607 | 313 | + 4-alpha-glucanotransferase. These enzymes EC:2.4.1.25 transfer a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan. | ||
PLN03236 | PLN03236 | 3.0e-163 | 255 | 662 | 425 | + 4-alpha-glucanotransferase; Provisional | ||
PLN02950 | PLN02950 | 0 | 8 | 665 | 659 | + 4-alpha-glucanotransferase |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004134 | 4-alpha-glucanotransferase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN50178.1 | 0 | 1 | 665 | 1 | 641 | disproportionating enzyme 2 [Annona cherimola] |
GenBank | EEC82629.1 | 0 | 8 | 665 | 5 | 637 | hypothetical protein OsI_27219 [Oryza sativa Indica Group] |
GenBank | EEE67756.1 | 0 | 8 | 665 | 10 | 642 | hypothetical protein OsJ_25466 [Oryza sativa Japonica Group] |
RefSeq | NP_001060547.1 | 0 | 8 | 665 | 5 | 637 | Os07g0662900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002461165.1 | 0 | 7 | 665 | 3 | 636 | hypothetical protein SORBIDRAFT_02g042100 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1tz7_B | 4e-27 | 291 | 607 | 22 | 328 | A Chain A, Aquifex Aeolicus Amylomaltase |
PDB | 1tz7_A | 4e-27 | 291 | 607 | 22 | 328 | A Chain A, Aquifex Aeolicus Amylomaltase |
PDB | 2x1i_A | 6e-27 | 325 | 645 | 38 | 343 | A Chain A, Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase From Thermus Brockianus |
PDB | 1fp9_A | 2e-26 | 325 | 608 | 38 | 316 | A Chain A, Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase From Thermus Brockianus |
PDB | 1fp8_A | 2e-26 | 325 | 608 | 38 | 316 | A Chain A, Structure Of The Amylomaltase From Thermus Thermophilus Hb8 In Space Group P21212 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1828 | EC-2.4.1.25 | 4-α-glucanotransferase |
starch degradation II | RXN-12391 | EC-2.4.1.25 | 4-α-glucanotransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779714 | 537 | 123 | 656 | 0 |
GO846888 | 297 | 369 | 665 | 0 |
GO838421 | 274 | 339 | 612 | 0 |
DT769159 | 292 | 326 | 617 | 0 |
DY939369 | 288 | 344 | 631 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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