y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00055985m |
Family | CE10 |
Protein Properties | Length: 352 Molecular Weight: 37911.1 Isoelectric Point: 7.2357 |
Chromosome | Chromosome/Scaffold: 079710 Start: 2306 End: 3361 |
Description | carboxyesterase 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 62 | 341 | 0 |
SRPDRSGVRSYDVTMDASRGIWARVYAPAAADRPLPVIVYYHGGGFALFSPAIGPFNGVCRRLCAAVGAVVVSVNYRLAPEHRWPAAYDDGVDALRFVDA NGVPGLGAEVPVDLASCFLAGESAGGNIVHHVANRWAARWQASARRVRVAGIFPVQPYFGGVERTESELRLEGVAPVVNLKRSDFSWTAFLPVGATRDHP AAHVTDENADLAEEFPPAMVVIGGLDPLMDWQRRYADVLRRKGKEVRVAEYPGMFHGFYGFPEVPEATTVLQDMKAFVDS |
Full Sequence |
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Protein Sequence Length: 352 Download |
EEATATATAA AKRPTPPPLP LLLRIQLAAF GAAIDAVERS DGTVNRCLYG VIDRLLSARP 60 SSRPDRSGVR SYDVTMDASR GIWARVYAPA AADRPLPVIV YYHGGGFALF SPAIGPFNGV 120 CRRLCAAVGA VVVSVNYRLA PEHRWPAAYD DGVDALRFVD ANGVPGLGAE VPVDLASCFL 180 AGESAGGNIV HHVANRWAAR WQASARRVRV AGIFPVQPYF GGVERTESEL RLEGVAPVVN 240 LKRSDFSWTA FLPVGATRDH PAAHVTDENA DLAEEFPPAM VVIGGLDPLM DWQRRYADVL 300 RRKGKEVRVA EYPGMFHGFY GFPEVPEATT VLQDMKAFVD SHRATPKPDA A* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 1.0e-8 | 86 | 190 | 118 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 6.0e-9 | 86 | 191 | 125 | + Carboxylesterase family. | ||
PRK10162 | PRK10162 | 8.0e-18 | 85 | 319 | 239 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 3.0e-36 | 52 | 342 | 293 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-57 | 99 | 320 | 222 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ04890.1 | 0 | 26 | 344 | 28 | 353 | hypothetical protein OsI_27072 [Oryza sativa Indica Group] |
GenBank | EAZ40846.1 | 0 | 26 | 344 | 28 | 353 | hypothetical protein OsJ_25325 [Oryza sativa Japonica Group] |
RefSeq | NP_001060443.1 | 0 | 26 | 344 | 32 | 357 | Os07g0643700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001150053.1 | 0 | 23 | 347 | 28 | 353 | LOC100283680 [Zea mays] |
RefSeq | XP_002463277.1 | 0 | 23 | 347 | 27 | 352 | hypothetical protein SORBIDRAFT_02g041050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 19 | 341 | 23 | 350 | A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT COMPLEXED WITH Cellotetraose |
PDB | 2zsh_A | 0 | 19 | 341 | 23 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 19 | 342 | 15 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 19 | 342 | 15 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 19 | 342 | 15 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE172342 | 259 | 90 | 347 | 0 |
DV508285 | 250 | 32 | 280 | 0 |
EE047941 | 240 | 32 | 270 | 0 |
EB160708 | 236 | 32 | 266 | 0 |
DV030155 | 234 | 32 | 264 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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