y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00041750m |
Family | CE10 |
Protein Properties | Length: 329 Molecular Weight: 34556.3 Isoelectric Point: 6.239 |
Chromosome | Chromosome/Scaffold: 017226 Start: 5422 End: 6408 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 40 | 316 | 0 |
FPDAPGVQWKDAVYDAARGLKVRVYRPHAAAGDEGKLPVLVYFHGGGYCIGAYDQPMFHSCCQRFAAELPAVVLSVQYRLAPEHRLPAAVEDAATFFSWL RAQASPGAGAGAEPWLAESADFSRTFVSGVSAGANLAHHAVVRIAAGQIVPGPAVRVAGYALFSAFFGSDERTATESDPPAGASLTVEMSDQLWRMALPA GVTRDHPLANPVAPGGASLETLPLPPALVVAPGRDVLCGHVLRYAARLKEMGKAVELAEFPGERHGFSVGQRSEATE |
Full Sequence |
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Protein Sequence Length: 329 Download |
MSGGGEAQRV VEDFFGVVRL LGDGSVVRGD ESALVPAGPF PDAPGVQWKD AVYDAARGLK 60 VRVYRPHAAA GDEGKLPVLV YFHGGGYCIG AYDQPMFHSC CQRFAAELPA VVLSVQYRLA 120 PEHRLPAAVE DAATFFSWLR AQASPGAGAG AEPWLAESAD FSRTFVSGVS AGANLAHHAV 180 VRIAAGQIVP GPAVRVAGYA LFSAFFGSDE RTATESDPPA GASLTVEMSD QLWRMALPAG 240 VTRDHPLANP VAPGGASLET LPLPPALVVA PGRDVLCGHV LRYAARLKEM GKAVELAEFP 300 GERHGFSVGQ RSEATEELMG ILKRFVNK* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 8.0e-7 | 59 | 121 | 63 | + Carboxylesterase family. | ||
COG2272 | PnbA | 4.0e-7 | 29 | 122 | 94 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 7.0e-10 | 42 | 207 | 168 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 2.0e-33 | 30 | 327 | 299 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-51 | 79 | 306 | 228 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF82397.1 | 0 | 4 | 328 | 3 | 330 | unknown [Zea mays] |
RefSeq | NP_001148081.1 | 0 | 7 | 328 | 6 | 330 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002455176.1 | 0 | 4 | 328 | 3 | 337 | hypothetical protein SORBIDRAFT_03g005570 [Sorghum bicolor] |
RefSeq | XP_002455177.1 | 0 | 10 | 327 | 12 | 338 | hypothetical protein SORBIDRAFT_03g005580 [Sorghum bicolor] |
RefSeq | XP_002455178.1 | 0 | 10 | 328 | 9 | 319 | hypothetical protein SORBIDRAFT_03g005590 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ed1_F | 1.4013e-45 | 35 | 327 | 52 | 348 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
PDB | 3ed1_E | 1.4013e-45 | 35 | 327 | 52 | 348 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
PDB | 3ed1_D | 1.4013e-45 | 35 | 327 | 52 | 348 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
PDB | 3ed1_C | 1.4013e-45 | 35 | 327 | 52 | 348 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
PDB | 3ed1_B | 1.4013e-45 | 35 | 327 | 52 | 348 | A Chain A, Solution Structure Of C-Terminal Domain Zipa |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL821289 | 241 | 7 | 240 | 0 |
CT846193 | 291 | 7 | 293 | 0 |
EE295886 | 225 | 1 | 219 | 0 |
DV029843 | 239 | 4 | 237 | 0 |
DV520621 | 237 | 4 | 235 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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