y
Basic Information | |
---|---|
Species | Selaginella moellendorffii |
Cazyme ID | 101241 |
Family | CE10 |
Protein Properties | Length: 336 Molecular Weight: 36968.4 Isoelectric Point: 6.5062 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 48 | 333 | 0 |
RDVLVDRGTGLQVRIFLPAAHSACKASTLSIIVYFHGGGFCMWTADTLYVHNFCAKLARAAHALVVSVSYRLAPEHRLPAAYEDGARVLQWLAGHKDSSH SFKLDEPLDPWIVSLADFSQCFLMGEGAGANVIHHVMLGRREKSLPVHGLILVHPLFGGEERTPSEVELEKTDMAAPIDMLDEFWKYCLPLGADRNHHFS NPFGDEVAKSLSDAEFPRALLVVAGRSSLQDRQFEYFNLLKSLNKDVLLLFLKNAAHGFEYMEGQVDQAKILLQFTVQFMAEKTSK |
Full Sequence |
---|
Protein Sequence Length: 336 Download |
MAACKSSELL ARNYTGVPGL FDVLPDGSVI RSDILSPSIA ANSSSFTRDV LVDRGTGLQV 60 RIFLPAAHSA CKASTLSIIV YFHGGGFCMW TADTLYVHNF CAKLARAAHA LVVSVSYRLA 120 PEHRLPAAYE DGARVLQWLA GHKDSSHSFK LDEPLDPWIV SLADFSQCFL MGEGAGANVI 180 HHVMLGRREK SLPVHGLILV HPLFGGEERT PSEVELEKTD MAAPIDMLDE FWKYCLPLGA 240 DRNHHFSNPF GDEVAKSLSD AEFPRALLVV AGRSSLQDRQ FEYFNLLKSL NKDVLLLFLK 300 NAAHGFEYME GQVDQAKILL QFTVQFMAEK TSKVS* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.003 | 72 | 121 | 51 | + Carboxylesterase family. | ||
pfam03096 | Ndr | 0.002 | 141 | 247 | 121 | + Ndr family. This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted. The precise molecular and cellular function of members of this family is still unknown. Yet, they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases pfam00561, suggesting that this family may have an enzymatic function (Bateman A pers. obs.). | ||
PRK10162 | PRK10162 | 4.0e-12 | 46 | 205 | 165 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 4.0e-27 | 55 | 332 | 280 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 4.0e-49 | 79 | 306 | 229 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK23572.1 | 0 | 18 | 327 | 15 | 330 | unknown [Picea sitchensis] |
GenBank | ABK25184.1 | 0 | 19 | 328 | 11 | 324 | unknown [Picea sitchensis] |
GenBank | ABK25952.1 | 0 | 19 | 333 | 11 | 329 | unknown [Picea sitchensis] |
GenBank | ABK26852.1 | 0 | 15 | 328 | 5 | 322 | unknown [Picea sitchensis] |
GenBank | ABK26900.1 | 0 | 17 | 333 | 9 | 327 | unknown [Picea sitchensis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 0 | 25 | 330 | 28 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2o7r_A | 0 | 25 | 330 | 28 | 334 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsi_A | 1.99965e-42 | 25 | 306 | 44 | 328 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsh_A | 1.99965e-42 | 25 | 306 | 44 | 328 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 6e-39 | 44 | 323 | 63 | 344 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FE478997 | 240 | 1 | 240 | 0 |
FE509264 | 209 | 15 | 223 | 0 |
FE478996 | 197 | 140 | 336 | 0 |
FE436391 | 169 | 1 | 169 | 0 |
FE479244 | 189 | 145 | 333 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|