y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00047036m |
Family | GT20 |
Protein Properties | Length: 805 Molecular Weight: 90996.2 Isoelectric Point: 6.5106 |
Chromosome | Chromosome/Scaffold: 0133903 Start: 5 End: 2658 |
Description | UDP-Glycosyltransferase / trehalose-phosphatase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT20 | 6 | 479 | 0 |
GWDFAWDEDSLLLQVKDSLRAHHGRGDVEFVYVGGLRDDVPPAEHDQVAHELLEGFRCVPTFLPADLRSRFYHGFCKQQLWPLFHYMLPLSPELGGRFDR LLWQAYVSVNKIFADKILEVISPDEDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREELLRSLLNADLIGFHTFDYARHFLSCCS RMLGLKYESQRGYIALEYYGRTVTIKILPVGVHLEQLQSVLNLPETGVKVAELLKQFNHRSRLLLLGVDDMDIFKGISLKLLAFEQLLMQHPKWRGRVVL VQIANPARGKGKDVKEVQEESDAMVKRINDAFGQPDYQPVILIDKPLRFYERMAYYVVAECCLVTAVRDGMNLIPYEYIIARQGNEMIDRILGLGPSSRK KSMLVVSEFIGCSPSLSGAIRVNPWNIDSVADAMDSALEMPEGEKVLRHEKHHRYVSTHDVGYWANSFLQDLER |
Full Sequence |
---|
Protein Sequence Length: 805 Download |
RAGGAGWDFA WDEDSLLLQV KDSLRAHHGR GDVEFVYVGG LRDDVPPAEH DQVAHELLEG 60 FRCVPTFLPA DLRSRFYHGF CKQQLWPLFH YMLPLSPELG GRFDRLLWQA YVSVNKIFAD 120 KILEVISPDE DFVWVHDYHL MVLPTFLRKR FNRVKLGFFL HSPFPSSEIY KTLPVREELL 180 RSLLNADLIG FHTFDYARHF LSCCSRMLGL KYESQRGYIA LEYYGRTVTI KILPVGVHLE 240 QLQSVLNLPE TGVKVAELLK QFNHRSRLLL LGVDDMDIFK GISLKLLAFE QLLMQHPKWR 300 GRVVLVQIAN PARGKGKDVK EVQEESDAMV KRINDAFGQP DYQPVILIDK PLRFYERMAY 360 YVVAECCLVT AVRDGMNLIP YEYIIARQGN EMIDRILGLG PSSRKKSMLV VSEFIGCSPS 420 LSGAIRVNPW NIDSVADAMD SALEMPEGEK VLRHEKHHRY VSTHDVGYWA NSFLQDLERT 480 CLDHNRRRCW GIGFGLKFRV VALDPNFKKL AVEHLVSAYR RTTKRIILLD YDGTLMPQTS 540 FGKSPTSRTI DMLNSLCRDK NNMVFLVSTK SRTTLSEWFS PCENLGLAAE HGYFLRLRRD 600 AEWEECVTVI DCSWKQIAEP VMKTYTETTD GSTIEDKETA IVWSYEDADP DFGSCQAKEL 660 HDHLESVLSN EPVSVKAGLN HVEVKPQGVS KGLVAKRILS TMQERGDLPD FILCVGDDRS 720 DEDMFEVITT AAARGPSSLH PEAEVFACTV GRKPSKAKYY LDDPADIVRL IQGLANVSND 780 QASHGGSGAT LPDDAAAAAA TVLR* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03063 | PLN03063 | 1.0e-158 | 1 | 779 | 815 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN02205 | PLN02205 | 0 | 3 | 779 | 777 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] | ||
pfam00982 | Glyco_transf_20 | 0 | 7 | 479 | 476 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 24 | 777 | 759 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
cd03788 | GT1_TPS | 0 | 3 | 478 | 476 | + Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52003.1 | 0 | 1 | 779 | 69 | 842 | AC012563_13 putative trehalose-6-phosphate synthase; 46897-44149 [Arabidopsis thaliana] |
GenBank | EEC84539.1 | 0 | 7 | 804 | 96 | 885 | hypothetical protein OsI_31278 [Oryza sativa Indica Group] |
RefSeq | NP_001063104.1 | 0 | 7 | 804 | 77 | 866 | Os09g0397300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002284972.1 | 0 | 6 | 778 | 82 | 848 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002460185.1 | 0 | 2 | 795 | 71 | 860 | hypothetical protein SORBIDRAFT_02g024140 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 76 | 481 | 75 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 76 | 481 | 75 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 76 | 481 | 75 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 76 | 481 | 75 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 0 | 76 | 481 | 76 | 455 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO777775 | 788 | 1 | 783 | 0 |
HO779327 | 516 | 31 | 546 | 0 |
HO779327 | 244 | 541 | 784 | 0 |
HO795560 | 432 | 353 | 783 | 0 |
HO797286 | 479 | 309 | 787 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|