y
Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.006G094700.2 |
Family | GT20 |
Protein Properties | Length: 942 Molecular Weight: 106672 Isoelectric Point: 5.8667 |
Chromosome | Chromosome/Scaffold: 06 Start: 33233903 End: 33241088 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT20 | 112 | 580 | 0 |
SKQRLLVVANRLPVSAVRHGEDSWQLEMSVGGLVTALLGVKEFDTRWIGWAGVNVPDEIGQKALAKALDEKRCIPVFLDEEVVHQYYNGYCNNILWPLFH YIGLPQEDRLATTRSFQSQFDAYKKANQLFADVVNEHYEEGDVVWCHDYHLMFLPKCLKERNSKMKVGWFLHTPFPSSEIHRMLPSRLELLRSVLAADLV GFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRIAAFPVGIDSERFIKALELPEVQDHMKVLKQRFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEE NPNWCNKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEYVACQESKKGVLI LSEFAGAAQSLGAGAILVNPWNVTEVASSIGYALNMPADEREKRHHHNFKHVISHTAQEWAATFVSELN |
Full Sequence |
---|
Protein Sequence Length: 942 Download |
MSISSQEICI LPNKNNLALL QTNGMPGNLY NNCSNLPATP TRLERLLRER ELRKYSKCLN 60 DCEAELPSST QDCFSPDLET STCWFNDEEL LETVSASRSL NDDGERLDFR TSKQRLLVVA 120 NRLPVSAVRH GEDSWQLEMS VGGLVTALLG VKEFDTRWIG WAGVNVPDEI GQKALAKALD 180 EKRCIPVFLD EEVVHQYYNG YCNNILWPLF HYIGLPQEDR LATTRSFQSQ FDAYKKANQL 240 FADVVNEHYE EGDVVWCHDY HLMFLPKCLK ERNSKMKVGW FLHTPFPSSE IHRMLPSRLE 300 LLRSVLAADL VGFHTYDYAR HFVSACTRIL GLEGTPEGVE DQGKLTRIAA FPVGIDSERF 360 IKALELPEVQ DHMKVLKQRF AGRKVMLGVD RLDMIKGIPQ KILAFEKFLE ENPNWCNKVV 420 LLQIAVPTRT DVPEYQKLTS QVHEIVGRIN GRFGSLTAVP IHHLDRSLDF HELCALYAVT 480 DVALVTSLRD GMNLVSYEYV ACQESKKGVL ILSEFAGAAQ SLGAGAILVN PWNVTEVASS 540 IGYALNMPAD EREKRHHHNF KHVISHTAQE WAATFVSELN VTIVEAQLRT RQIPPPLPIE 600 VAVDRYSCLN NRLLILGFNA TLTEPVDTLG RKDSQINEWE PKLRPDLREP LRKLCDDPKT 660 TVLVLSGSAR NVLDDNFSDY NLWLAAENGM FLRVTTGDWM TTMPENLSME WVDSVKNVFE 720 YFTDRTPRSQ FEVRETSLIW NYKYSDVEFG RLQARDLLQH LWTGPISNAS LDVVQGRRSV 780 EVRSVAVTKG AAIDRILGEI VHNKGMKEPI DYVLCIGHFL TKDEDIYTFF EPELPSEVPA 840 SVRPQVPTQV RTSIVGSRAA LLMKQNSMSA VEQNKSYAID GDTLHSMVTD RISLQEGSSV 900 LDLQANDYFS CSVARKRSNS RYRLQSSDEV VTLLRELADH R* 960 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 25 | 939 | 929 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 108 | 940 | 833 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 115 | 580 | 468 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
pfam00982 | Glyco_transf_20 | 0 | 114 | 580 | 473 | + Glycosyltransferase family 20. Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. | ||
PRK14501 | PRK14501 | 0 | 115 | 827 | 722 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA69879.1 | 0 | 25 | 939 | 1 | 937 | trehalose-6-phosphate synthase [Arabidopsis thaliana] |
RefSeq | NP_177979.1 | 0 | 25 | 939 | 1 | 937 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002305707.1 | 0 | 47 | 941 | 1 | 896 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522296.1 | 0 | 25 | 939 | 1 | 910 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
RefSeq | XP_002531237.1 | 0 | 25 | 938 | 1 | 920 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wtx_D | 0 | 115 | 591 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_C | 0 | 115 | 591 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_B | 0 | 115 | 591 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_A | 0 | 115 | 591 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1uqu_B | 0 | 115 | 591 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CX546763 | 305 | 101 | 404 | 0 |
ES813375 | 361 | 476 | 836 | 0 |
CV711307 | 294 | 112 | 405 | 0 |
DW069910 | 288 | 201 | 488 | 0 |
CB651133 | 280 | 142 | 421 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|