y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.F03232.1 |
Family | GT20 |
Protein Properties | Length: 926 Molecular Weight: 104115 Isoelectric Point: 6.8179 |
Chromosome | Chromosome/Scaffold: 6 Start: 41529491 End: 41542221 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 85 | 553 | 0 |
SRQRLLVVANRLPVSAVRRGEDSWSLEMSSGGLVTALLGVKGFEARWIGWAGVNVPDEIGQRALTDALAQKKCIPVFLDEEIVHQYYNGYCNNILWPLFH YLGLPQEDRLATTRSFQSQFFAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEYNSQMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLV GFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDADRFIRALDTQPVQDHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEE NSNWHDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHKLCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLI LSEFAGAAQSLGAGAILVNPWNITEVAVSIAQALNMPAEEREKRHRHNYAHVTTHTAQEWAEMFVSELN |
Full Sequence |
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Protein Sequence Length: 926 Download |
MPGNKYNGNT VHFPGRVERL LRERELRKSS RATHSNETTE AELEHGLRFR DGENSGISNV 60 EQFLEGAAAA RAFTEGFERP DGRSSRQRLL VVANRLPVSA VRRGEDSWSL EMSSGGLVTA 120 LLGVKGFEAR WIGWAGVNVP DEIGQRALTD ALAQKKCIPV FLDEEIVHQY YNGYCNNILW 180 PLFHYLGLPQ EDRLATTRSF QSQFFAYQKA NQMFADVVNK HYEEGDVVWC HDYHLMFLPK 240 CLKEYNSQMK VGWFLHTPFP SSEIHRTLPS RSELLRAVLA ADLVGFHTYD YARHFVSACT 300 RILGLEGTPE GVEDQGRLTR VAAFPIGIDA DRFIRALDTQ PVQDHIKELK ERFAGRKVML 360 GVDRLDMIKG IPQKILAFEK FLEENSNWHD KVVLLQIAVP TRTDVPEYQK LTSQVHEIVG 420 RINGRFGTLT AVPIHHLDRS LDFHKLCALY AVTDVALVTS LRDGMNLVSY EFVACQDSKK 480 GVLILSEFAG AAQSLGAGAI LVNPWNITEV AVSIAQALNM PAEEREKRHR HNYAHVTTHT 540 AQEWAEMFVS ELNDTVVEAQ LRTKQVPPLL PVQDAIGRYL LSNNRLLILG FNATLTEPVD 600 TPGRRGDQIK EMDLKLHPEL KEPLTALCSD SRTTVVVLSG SDRIVLDDNF AEYNMWLAAE 660 NGMFLRLTKG DWMTTMPEHL NMEWVDSVKH VFEYFTERTP RSHFEHRETS LVWNYKYADV 720 EFGRLQARDM LQHLWTGPIS NASVDVVQGS RSVEVRAVGV TKGAAIDRIL GEIVHSKSMT 780 TPIDYVLCIG HFLGKDEDVY TFFEPELPCD ALGIPRTKAT DGLKSPGEKR SSLKLQASKS 840 GSKASAVKTQ RPLPNPEKRT NNHASGSGRR SSPDKISWNV LDLKGENYFS CAVGRTRTNA 900 RYMLTSSDDV VSFLKELASA SLFEE* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 1 | 921 | 930 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 81 | 921 | 841 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PRK14501 | PRK14501 | 0 | 88 | 830 | 752 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 88 | 554 | 469 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO61742.1 | 0 | 1 | 922 | 1 | 921 | trehalose-phosphate synthase 1 [Solanum lycopersicum] |
RefSeq | NP_177979.1 | 0 | 1 | 921 | 1 | 939 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002285632.1 | 0 | 1 | 920 | 1 | 923 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331300.1 | 0 | 1 | 921 | 1 | 921 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531237.1 | 0 | 1 | 921 | 1 | 923 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wtx_D | 0 | 88 | 564 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_C | 0 | 88 | 564 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_B | 0 | 88 | 564 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 2wtx_A | 0 | 88 | 564 | 3 | 466 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1uqu_B | 0 | 88 | 564 | 3 | 466 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES813375 | 361 | 449 | 809 | 0 |
CX546763 | 315 | 64 | 377 | 0 |
CV711307 | 294 | 85 | 378 | 0 |
DW069910 | 288 | 174 | 461 | 0 |
CX545499 | 305 | 391 | 695 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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