y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10026487 |
Family | GT43 |
Protein Properties | Length: 376 Molecular Weight: 42250.1 Isoelectric Point: 9.0705 |
Chromosome | Chromosome/Scaffold: 617 Start: 48048 End: 50369 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 152 | 362 | 0 |
LANTLRLVAGPLLGVVVEQKQSAETNGLSEMLRKTGMMYRHLVFKENITDPEVELEHQRNVALKHVEHHRLSGIVHFAGIHNVYDLDFFDDLREIEMFGT WPMASLSPYKSEVVIEGPVCDSSQVIGWHLKKMNGQTDNDTEIARPPIHVSSFAFNSSILWDPERWGRPSYSEHTSQNSIKFVKEVALDDDTKLKGIPST ECSKIMMWRLR |
Full Sequence |
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Protein Sequence Length: 376 Download |
MGSLERPRKK VQIWKKAVVH FALCFVLGFF NGFAPTSKSS MFSSSTTTTT TSSSRSVISS 60 NTSHAPPQIA SLHSTSRKIN ITRSTTSEPP VSSTTPYAGE QSSNSEDRKT EEEFTGTAEF 120 VPDLKLTSRR LIIIITPTNA RDPYQAVQLR RLANTLRLVA GPLLGVVVEQ KQSAETNGLS 180 EMLRKTGMMY RHLVFKENIT DPEVELEHQR NVALKHVEHH RLSGIVHFAG IHNVYDLDFF 240 DDLREIEMFG TWPMASLSPY KSEVVIEGPV CDSSQVIGWH LKKMNGQTDN DTEIARPPIH 300 VSSFAFNSSI LWDPERWGRP SYSEHTSQNS IKFVKEVALD DDTKLKGIPS TECSKIMMWR 360 LRFPIKKVVP TTFFM* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 5.0e-50 | 152 | 364 | 221 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 6.0e-73 | 130 | 364 | 240 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 7.0e-164 | 1 | 367 | 367 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ54338.1 | 0 | 1 | 370 | 1 | 352 | glycuronosyltransferase-like protein [Gossypium hirsutum] |
GenBank | AAX33319.1 | 0 | 1 | 367 | 1 | 343 | secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides] |
GenBank | ABP65661.1 | 0 | 1 | 367 | 1 | 343 | secondary wall-associated glycosyltransferase family 43B [Populus tremula x Populus alba] |
RefSeq | XP_002323456.1 | 0 | 1 | 367 | 1 | 344 | glycosyl transferase [Populus trichocarpa] |
RefSeq | XP_002326337.1 | 0 | 1 | 367 | 1 | 340 | glycosyl transferase [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2d0j_D | 0.00000000003 | 132 | 362 | 5 | 225 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_C | 0.00000000003 | 132 | 362 | 5 | 225 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_B | 0.00000000003 | 132 | 362 | 5 | 225 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_A | 0.00000000003 | 132 | 362 | 5 | 225 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v84_B | 0.0000000001 | 132 | 362 | 5 | 232 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |