y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra005218 |
Family | GT43 |
Protein Properties | Length: 348 Molecular Weight: 39356.1 Isoelectric Point: 9.7051 |
Chromosome | Chromosome/Scaffold: 05 Start: 4077289 End: 4078738 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 133 | 338 | 0 |
MANTLRLVPPPLLWIVVEKHSEADVNSSSTMLRKTGLMYRRIVFKENFTSLEAELDHQRNLALRHIEHHKLSGIVHFAGLNNIYDLDFFDEIRDIEVFGT WPMALLSANRKRVIVEGPVCESSQVLGWHLRKINNETETKPPVHISSFAFNSSILWDPERWGRPSSVEGTKQDSIKYVKQVVLEDDTKLKGLPAQDCSKV MLWRLN |
Full Sequence |
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Protein Sequence Length: 348 Download |
MGSLERSKKK TQVWKKAVIH FSLCFVMGFF TGFAPAGKAS LFSNFETTPS TTSKSQIPPH 60 PSENSTYTPN SLADKALVSS QVQAPSPSKS QEAEPENRSL SETEEEVTPR GLVIVVTPVM 120 TKDRYKNVLL RRMANTLRLV PPPLLWIVVE KHSEADVNSS STMLRKTGLM YRRIVFKENF 180 TSLEAELDHQ RNLALRHIEH HKLSGIVHFA GLNNIYDLDF FDEIRDIEVF GTWPMALLSA 240 NRKRVIVEGP VCESSQVLGW HLRKINNETE TKPPVHISSF AFNSSILWDP ERWGRPSSVE 300 GTKQDSIKYV KQVVLEDDTK LKGLPAQDCS KVMLWRLNFP TRTRFST* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 3.0e-72 | 133 | 341 | 223 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 1.0e-88 | 112 | 341 | 235 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 0 | 1 | 346 | 351 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33319.1 | 0 | 1 | 341 | 1 | 341 | secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides] |
GenBank | ABP65661.1 | 0 | 1 | 341 | 1 | 341 | secondary wall-associated glycosyltransferase family 43B [Populus tremula x Populus alba] |
EMBL | CAI93178.1 | 0 | 1 | 340 | 1 | 341 | glycosyltransferase [Populus balsamifera] |
RefSeq | NP_181246.1 | 0 | 1 | 347 | 1 | 351 | IRX9 (IRREGULAR XYLEM 9); transferase, transferring glycosyl groups / xylosyltransferase [Arabidopsis thaliana] |
RefSeq | XP_002323456.1 | 0 | 1 | 341 | 1 | 342 | glycosyl transferase [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 0.000000000007 | 115 | 335 | 7 | 229 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1v84_A | 0.000000000007 | 115 | 335 | 7 | 229 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1v83_B | 0.000000000007 | 115 | 335 | 7 | 229 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1v83_A | 0.000000000007 | 115 | 335 | 7 | 229 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1v82_B | 0.000000000007 | 115 | 335 | 7 | 229 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |