y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.003G026800.1 |
Family | GT43 |
Protein Properties | Length: 502 Molecular Weight: 56681.4 Isoelectric Point: 10.4251 |
Chromosome | Chromosome/Scaffold: 03 Start: 2430444 End: 2433434 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 180 | 414 | 0 |
MHSLMLVPYDLVWIVVEAGGVSNETASLIAKSGRRTIHVGFSQRMPNSWDERHKLETKMRLRGLRIVREKILDGIVIFADDSNMHSMELFDEIQNVKWFG AVSVGILANSANIDEMVVEKRGEEENPRMPVQGPACNVSNMLAGWHTFNTLPFAGKSAVYIDDRATVLPRKLEWSGFVLNSRLLWKDGDKPEWMKDIDTL DGDIESPLDLVKDPLVVEPLGSCGRRVLLWWLRVE |
Full Sequence |
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Protein Sequence Length: 502 Download |
MKLSALQQSY LGRRSNSFRS SGPLDSSSDG AFKSPAAVFW LVLHGLSCLI SLLLGFRFSR 60 LVFLLLSTSS TYTSPFHSPT ELAKTLDIRS VIPADPVGNV PLPFPNKTAT NSRVVVGRHG 120 IRIRPWPHPN PVEVMKAHRI IERVQTEQRL QFGVKDPRKI IVVTPTYVRT FQSLHLTGVM 180 HSLMLVPYDL VWIVVEAGGV SNETASLIAK SGRRTIHVGF SQRMPNSWDE RHKLETKMRL 240 RGLRIVREKI LDGIVIFADD SNMHSMELFD EIQNVKWFGA VSVGILANSA NIDEMVVEKR 300 GEEENPRMPV QGPACNVSNM LAGWHTFNTL PFAGKSAVYI DDRATVLPRK LEWSGFVLNS 360 RLLWKDGDKP EWMKDIDTLD GDIESPLDLV KDPLVVEPLG SCGRRVLLWW LRVEARADSK 420 FPPRWIIDPP LEVTVPSKRT PWPDTPPELP SHEKPVIGIQ EPVIKHTTKT RTSRSKRRSK 480 RKHDETRTDR RTTGFDKTLQ N* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02458 | PLN02458 | 5.0e-15 | 129 | 364 | 237 | + transferase, transferring glycosyl groups | ||
pfam03360 | Glyco_transf_43 | 4.0e-48 | 179 | 415 | 247 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 2.0e-57 | 160 | 415 | 265 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI93186.1 | 0 | 1 | 476 | 1 | 476 | glycosyltransferase [Gossypium raimondii] |
EMBL | CAI94900.1 | 0 | 1 | 470 | 1 | 461 | glycosyltransferase [Glycine max] |
RefSeq | XP_002283249.1 | 0 | 1 | 469 | 1 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306485.1 | 0 | 1 | 484 | 1 | 487 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002310709.1 | 0 | 1 | 470 | 1 | 478 | glycosyl transferase, CAZy family GT43 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1kws_B | 0.0000000001 | 160 | 414 | 3 | 238 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 1kws_A | 0.0000000001 | 160 | 414 | 3 | 238 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 1fgg_B | 0.0000000001 | 160 | 414 | 3 | 238 | A Chain A, Crystal Structure Of 1,3-Glucuronyltransferase I (Glcat-I) Complexed With Gal-Gal-Xyl, Udp, And Mn2+ |
PDB | 1fgg_A | 0.0000000001 | 160 | 414 | 3 | 238 | A Chain A, Crystal Structure Of 1,3-Glucuronyltransferase I (Glcat-I) Complexed With Gal-Gal-Xyl, Udp, And Mn2+ |
PDB | 3cu0_B | 0.0000000001 | 160 | 414 | 23 | 258 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |