y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10007584 |
Family | GH9 |
Protein Properties | Length: 398 Molecular Weight: 44176.8 Isoelectric Point: 8.5883 |
Chromosome | Chromosome/Scaffold: 259 Start: 233232 End: 234767 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 1 | 255 | 0 |
MTMLSWSVIEYSAKYEAVGELNHIKDIIKWGTDYLLKTFNHTADTIDRIVSQVGSGDTSGGSTTPNDHYCWTRPEDIDYERPVTECHTCSDLAAEMAAAL ASASIVFKDNKAYSQKLVHGARTLFKFSRDQRGRYSAGSAEAGTFYNSTGYWDEFVWAGTWLYYATGNNSYLSLATTPGIAKHAGAFWGGPDYGVFSWDN KLTGAQVLLSRLRLFLSPGYPYEEILRTFHNQTSIVMCSYLPYFSSFNRTKGNPF |
Full Sequence |
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Protein Sequence Length: 398 Download |
MTMLSWSVIE YSAKYEAVGE LNHIKDIIKW GTDYLLKTFN HTADTIDRIV SQVGSGDTSG 60 GSTTPNDHYC WTRPEDIDYE RPVTECHTCS DLAAEMAAAL ASASIVFKDN KAYSQKLVHG 120 ARTLFKFSRD QRGRYSAGSA EAGTFYNSTG YWDEFVWAGT WLYYATGNNS YLSLATTPGI 180 AKHAGAFWGG PDYGVFSWDN KLTGAQVLLS RLRLFLSPGY PYEEILRTFH NQTSIVMCSY 240 LPYFSSFNRT KGNPFSLSIL EDMYIDYVLG KNPRKMSYVV GFGNHYPKHV HHRGASIPHN 300 KVKYSCKGGW KWRDTKKPNP NTLVGAMVAG PDRHDGFKDV RMNYNYTEPT LAGNAGLVAA 360 LIALSGDGTS NIDKNTIFSA VPPMFPTPPP PPAPWKP* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02340 | PLN02340 | 5.0e-68 | 1 | 366 | 423 | + endoglucanase | ||
PLN02613 | PLN02613 | 2.0e-68 | 2 | 366 | 419 | + endoglucanase | ||
PLN00119 | PLN00119 | 1.0e-68 | 2 | 365 | 415 | + endoglucanase | ||
PLN02345 | PLN02345 | 9.0e-97 | 2 | 368 | 420 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-109 | 1 | 361 | 399 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49704.1 | 0 | 1 | 381 | 177 | 601 | endo-1,4-beta-glucanase [Solanum lycopersicum] |
GenBank | AAT75041.1 | 0 | 1 | 381 | 178 | 603 | Cel9A [Populus tremula x Populus tremuloides] |
GenBank | AAZ08322.1 | 0 | 1 | 381 | 15 | 440 | endo-1,4-beta-glucanase [Eucalyptus globulus] |
EMBL | CBI29606.1 | 0 | 1 | 381 | 60 | 485 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002519394.1 | 0 | 1 | 381 | 180 | 605 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 2 | 364 | 70 | 428 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1ksc_A | 0 | 2 | 364 | 70 | 428 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1ks8_A | 0 | 2 | 364 | 70 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ia7_A | 7e-35 | 3 | 361 | 73 | 423 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ia6_A | 7e-35 | 3 | 361 | 73 | 423 | A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794674 | 426 | 1 | 381 | 0 |
HO796213 | 426 | 1 | 381 | 0 |
BF010444 | 429 | 1 | 381 | 0 |
HO779161 | 319 | 108 | 381 | 0 |
HO779161 | 91 | 1 | 91 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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