y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G089500.1 |
Family | GH9 |
Protein Properties | Length: 622 Molecular Weight: 68785 Isoelectric Point: 9.1998 |
Chromosome | Chromosome/Scaffold: 11 Start: 9386928 End: 9390624 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 111 | 585 | 0 |
NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLRDGKSDPGTTMKDLVGGYYDAGDAIKFNFPASFAMTMLSWSVIEYSAKYEAAGELNHVKEIIKWG TDYLLKTFNNSADTIDKIAAQVGVGDTSGGSTTPNDHYCWMRPEDIDYPRPVYECHSCSDLAAEMAAALAAASIVFKDNKAYSQKLVHGARTVFQFARDQ RGRYSAGGSDPALFYNSSSYWDEFVWGGAWLYYATGNSSYLQLATHPKLAKHAGAFWGGPDYGVLSWDNKLAGAQVLLSRLRLFLSPGYPYEEILRTFHN QTSIVMCSFLPVFTSFNRTKGGLIQLNHGRPQPLQYVVNAAFLAALYSDYLDAADTPGWYCGPNFYSTDVLREFAKTQMDYILGKNPRKMSYVVGFGNHY PKHVHHRGASIPKNKIRYNCKGGWKWRDSKKPNPNTLVGAMVAGPDKHDGFHDVRTNYNYTEPTLAGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 622 Download |
MSMYGRDPWG GPLEINAADS ATDDDRSRNL QDLDRAALSR PLDETQQSWL LGPSEQKKKK 60 KYVDLGCIIV SRKIFVWTVG TLVVSAVLAG LITLIVKTVP RHHHGKPPPD NYTLALHKAL 120 MFFNAQRSGK LPKHNNVSWR GNSCLRDGKS DPGTTMKDLV GGYYDAGDAI KFNFPASFAM 180 TMLSWSVIEY SAKYEAAGEL NHVKEIIKWG TDYLLKTFNN SADTIDKIAA QVGVGDTSGG 240 STTPNDHYCW MRPEDIDYPR PVYECHSCSD LAAEMAAALA AASIVFKDNK AYSQKLVHGA 300 RTVFQFARDQ RGRYSAGGSD PALFYNSSSY WDEFVWGGAW LYYATGNSSY LQLATHPKLA 360 KHAGAFWGGP DYGVLSWDNK LAGAQVLLSR LRLFLSPGYP YEEILRTFHN QTSIVMCSFL 420 PVFTSFNRTK GGLIQLNHGR PQPLQYVVNA AFLAALYSDY LDAADTPGWY CGPNFYSTDV 480 LREFAKTQMD YILGKNPRKM SYVVGFGNHY PKHVHHRGAS IPKNKIRYNC KGGWKWRDSK 540 KPNPNTLVGA MVAGPDKHDG FHDVRTNYNY TEPTLAGNAG LVAALVALSG DKSTGIDKNT 600 IFSAVPPMFP TPPPPPAPWK P* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02909 | PLN02909 | 1.0e-103 | 84 | 573 | 501 | + Endoglucanase | ||
PLN02613 | PLN02613 | 3.0e-105 | 110 | 574 | 476 | + endoglucanase | ||
PLN02266 | PLN02266 | 1.0e-107 | 102 | 573 | 487 | + endoglucanase | ||
PLN02345 | PLN02345 | 5.0e-130 | 115 | 574 | 471 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 6.0e-157 | 111 | 574 | 470 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP83128.1 | 0 | 3 | 605 | 1 | 603 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
GenBank | AAQ08018.1 | 0 | 3 | 605 | 1 | 603 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
GenBank | AAS87601.1 | 0 | 3 | 605 | 1 | 603 | membrane-anchored endo-1,4-beta-glucanase [Gossypium hirsutum] |
RefSeq | XP_002332697.1 | 0 | 3 | 605 | 1 | 603 | hypothetical protein POPTRDRAFT_675657 [Populus trichocarpa] |
RefSeq | XP_002519394.1 | 0 | 1 | 605 | 1 | 605 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 111 | 588 | 4 | 428 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1ksc_A | 0 | 111 | 588 | 4 | 428 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1ks8_A | 0 | 111 | 588 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 108 | 588 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 108 | 588 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |