y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10019972m |
Family | GH9 |
Protein Properties | Length: 625 Molecular Weight: 70254.9 Isoelectric Point: 9.7182 |
Chromosome | Chromosome/Scaffold: 2 Start: 7339061 End: 7343247 |
Description | Six-hairpin glycosidases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 117 | 588 | 0 |
NYTLAIHKAIKFFDAQKSGKLPKKNKVSWRGDSGLKDGFPDVVGGLVGGYYDGGSNGKFHFPMAFSMTMLSWSLIEYSHKYKAIDEYDHMRDVLKWGTDY LLLTFNNSATRLDHIYTQVGGGLRDSESPDDIYCWQRPEDMSYDRPVLSSTSAADLGAEVAAALSAASIVFTDKPDYAKKLKKGAETLYPFFRSKSRRRR YSDGQPTAQAFYNSTSMFDEFMWAGAWLYYATGNKTYIQFATTPSVPQTAKAFANRPELMVPSWNNKLPGAMLLMTRYRLFLNPGFPYENMLNRYHNATG VTMCAYLKQYNVFNRTSGGLLQLNMGKPRPLEYVAHASFLASLFADYLNSTGVPGWYCGPTFVEIHVLKEFAQSQIDYILGDNPLKMSYVVGFGKKFPRR VHHRAATIPNDKKRRSCREGLKYRDTKNPNPNNITGAMVGGPNKFDQFHDLRNNYNASEPTLSGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 625 Download |
MHPGNVWGGS LDAVDIDRAE AEEEEQRRRN MTDWDRGVNH SQRHELDETQ QGWLLAPQDS 60 WKKKKKRYVN LGCVSVSRTV FMWTVGSIAV LFIVVALPII IVKSLPKHES TLPPSDNYTL 120 AIHKAIKFFD AQKSGKLPKK NKVSWRGDSG LKDGFPDVVG GLVGGYYDGG SNGKFHFPMA 180 FSMTMLSWSL IEYSHKYKAI DEYDHMRDVL KWGTDYLLLT FNNSATRLDH IYTQVGGGLR 240 DSESPDDIYC WQRPEDMSYD RPVLSSTSAA DLGAEVAAAL SAASIVFTDK PDYAKKLKKG 300 AETLYPFFRS KSRRRRYSDG QPTAQAFYNS TSMFDEFMWA GAWLYYATGN KTYIQFATTP 360 SVPQTAKAFA NRPELMVPSW NNKLPGAMLL MTRYRLFLNP GFPYENMLNR YHNATGVTMC 420 AYLKQYNVFN RTSGGLLQLN MGKPRPLEYV AHASFLASLF ADYLNSTGVP GWYCGPTFVE 480 IHVLKEFAQS QIDYILGDNP LKMSYVVGFG KKFPRRVHHR AATIPNDKKR RSCREGLKYR 540 DTKNPNPNNI TGAMVGGPNK FDQFHDLRNN YNASEPTLSG NAGLVAALIS LTSSGGQRID 600 KNTMFNSVPP LYPPSPPPPK AWKP* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02340 | PLN02340 | 5.0e-88 | 117 | 596 | 495 | + endoglucanase | ||
PLN02266 | PLN02266 | 2.0e-90 | 73 | 597 | 542 | + endoglucanase | ||
PLN02613 | PLN02613 | 6.0e-96 | 115 | 608 | 509 | + endoglucanase | ||
PLN02345 | PLN02345 | 2.0e-115 | 125 | 595 | 483 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 6.0e-152 | 117 | 588 | 477 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT54547.1 | 0 | 1 | 608 | 1 | 612 | endo-1,4-beta-glucanase [Dimocarpus longan] |
RefSeq | NP_176738.1 | 0 | 1 | 624 | 1 | 623 | KOR2; catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002266444.1 | 0 | 1 | 608 | 1 | 603 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312211.1 | 0 | 1 | 624 | 1 | 620 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514768.1 | 0 | 1 | 608 | 1 | 608 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 117 | 595 | 4 | 432 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1ksc_A | 0 | 117 | 595 | 4 | 432 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1ks8_A | 0 | 117 | 595 | 4 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 114 | 617 | 2 | 461 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 114 | 617 | 2 | 461 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |