y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10024435m |
Family | AA5 |
Protein Properties | Length: 556 Molecular Weight: 61304.8 Isoelectric Point: 8.869 |
Chromosome | Chromosome/Scaffold: 3 Start: 423805 End: 425472 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 24 | 555 | 0 |
QDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTG GYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGN LFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITA QNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSAL FPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFSLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGAVQKSNTAGDYIVQCS APPTAALAPPGYCQLFLVNDGVPSKAVWVQIK |
Full Sequence |
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Protein Sequence Length: 556 Download |
MERKNSVCLL IAICCFSNLA LGSQDLEGKW KLLKRSIGVS AMHMALLPND RIIAFDRSHF 60 GPSNITLPQG KCIKGVELET SDCYAHAVEF DPITRKVRPL TIQTDTWCSS GALLANGVLV 120 QTGGYRLGER VVRYLKPCSD CDWEEDHQNG LISPRWYASN QILPNGKIIV VGGRFQFTYE 180 FIPRTSDSDR KILYQLPFLK ETMHSPKIPN NLYPFLHLST DGNLFIFAND RAILLDYVNN 240 RVMKNYPVMP GGISRNYPST GSSVLLPVNL SSINVHINNN NKPVVHSQVL ICGGTLPDSN 300 ENAAEAQIFL PAAKSCGRLT ITAQNPKWEM EEMPLNRVMG DMILLPTGDV LIINGAAKGT 360 AGWGAAREPV LNPVIYCPKI NRFRILSPSL IPRLYHSTAH LLSDGRVLVG GSNPNVNYNF 420 SALFPTELSL QAFYPPYFNL MSNRSRPSIS TVKPGAFLKL KYTENFSLGF KLRSGDLGEI 480 FVTMVAPSFT THSFAMNQRL LVLELHGAVQ KSNTAGDYIV QCSAPPTAAL APPGYCQLFL 540 VNDGVPSKAV WVQIK* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 3.0e-24 | 446 | 554 | 110 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-28 | 442 | 554 | 114 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-105 | 42 | 294 | 258 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN83495.1 | 0 | 7 | 555 | 14 | 549 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272723.1 | 0 | 7 | 555 | 9 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299426.1 | 0 | 1 | 555 | 1 | 546 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510488.1 | 0 | 28 | 555 | 31 | 547 | Galactose oxidase precursor, putative [Ricinus communis] |
RefSeq | XP_002518913.1 | 0 | 20 | 555 | 20 | 546 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eic_A | 0.000000000002 | 89 | 554 | 206 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 1t2x_A | 0.000000000002 | 89 | 554 | 206 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2wq8_A | 0.000000000003 | 89 | 554 | 228 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2vz3_A | 0.000000000006 | 89 | 554 | 206 | 637 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2vz1_A | 0.000000000006 | 89 | 554 | 206 | 637 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |