y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 34899.m000019 |
Family | GH31 |
Protein Properties | Length: 564 Molecular Weight: 63807.6 Isoelectric Point: 6.0098 |
Chromosome | Chromosome/Scaffold: 34899 Start: 158 End: 1849 |
Description | Glycosyl hydrolases family 31 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH31 | 218 | 564 | 0 |
FIVADDFVTLVERISQRFGRQPALPAWVMDGAILGLKNGREHAQTIMQQSRAAGIKVSGLWCEDWVGIRQTSFGKRLFWDWRWNETRYPGHAEWMKQLNA EGVRFLGYVNPYLCNDGTLYVEAKAAGYLATRADGGDYLVDFGEFDCGVVDFTNPAAARWFEERVIRDEMLNQGLDGWMADFGEYLPTDVTLANGIDAKL MHNAWPTLWAEVNARAIQGAGRTGDAVFFMRAGYTGVQAHCPLLWAGDQSVDFTRHDGLQTVICGALSSGLLGNAYHHSDIGGYTSLFGNTRTPELFQRW AEMAAFTPMMRTHEGNRPDDNFQFWQDAGVLAHFARMTRVFVALKPY |
Full Sequence |
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Protein Sequence Length: 564 Download |
MNWQTEAGGK LVLRVAGRTL FEHAPDTPAV FVGRGVEKID MYRGNFDINN YVEERVALRE 60 ARFTLLHDGS ARIELARDAQ AAAELTIHAI QSAHGVHLAL SATGEINRVW WRVPAQRDEH 120 VWGCGEQMSY FDLRGRNFPL WTSEPGVGRD KSTHLTWQAD TTSKSGGDYY NTNYPQPSFV 180 SSQKYCLHAQ TTAYADFDFR HPEWHELQFW AIPERLEFIV ADDFVTLVER ISQRFGRQPA 240 LPAWVMDGAI LGLKNGREHA QTIMQQSRAA GIKVSGLWCE DWVGIRQTSF GKRLFWDWRW 300 NETRYPGHAE WMKQLNAEGV RFLGYVNPYL CNDGTLYVEA KAAGYLATRA DGGDYLVDFG 360 EFDCGVVDFT NPAAARWFEE RVIRDEMLNQ GLDGWMADFG EYLPTDVTLA NGIDAKLMHN 420 AWPTLWAEVN ARAIQGAGRT GDAVFFMRAG YTGVQAHCPL LWAGDQSVDF TRHDGLQTVI 480 CGALSSGLLG NAYHHSDIGG YTSLFGNTRT PELFQRWAEM AAFTPMMRTH EGNRPDDNFQ 540 FWQDAGVLAH FARMTRVFVA LKPY 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06593 | GH31_xylosidase_YicI | 4.0e-46 | 293 | 530 | 240 | + YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes. | ||
pfam01055 | Glyco_hydro_31 | 7.0e-60 | 218 | 564 | 356 | + Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. | ||
COG1501 | COG1501 | 7.0e-114 | 24 | 564 | 548 | + Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | ||
cd06594 | GH31_glucosidase_YihQ | 3.0e-170 | 236 | 552 | 318 | + YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. | ||
PRK10426 | PRK10426 | 0 | 5 | 564 | 560 | + alpha-glucosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBK91527.1 | 0 | 13 | 564 | 12 | 557 | Alpha-glucosidases, family 31 of glycosyl hydrolases [Eubacterium rectale A1-86 (DSM 17629)] |
EMBL | CBL07052.1 | 0 | 39 | 564 | 1 | 522 | Alpha-glucosidases, family 31 of glycosyl hydrolases [Megamonas hypermegale ART12/1] |
RefSeq | NP_357320.1 | 0 | 1 | 564 | 1 | 554 | alpha-glucosidase [Agrobacterium tumefaciens str. C58] |
RefSeq | XP_002536091.1 | 0 | 1 | 564 | 1 | 564 | alpha-xylosidase, putative [Ricinus communis] |
RefSeq | YP_002938457.1 | 0 | 13 | 564 | 12 | 557 | alpha-glucosidase [Eubacterium rectale ATCC 33656] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4ba0_A | 7e-30 | 103 | 564 | 139 | 573 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
PDB | 4b9z_A | 7e-30 | 103 | 564 | 139 | 573 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
PDB | 4b9y_A | 7e-30 | 103 | 564 | 139 | 573 | A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In Glycoside Hydrolase Family 31 |
PDB | 1we5_F | 8e-29 | 149 | 530 | 174 | 540 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
PDB | 1we5_E | 8e-29 | 149 | 530 | 174 | 540 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY680546 | 246 | 229 | 469 | 0 |
HO371826 | 195 | 256 | 450 | 0 |
HO417778 | 294 | 293 | 564 | 0 |
DY975686 | 282 | 304 | 564 | 0 |
FG439730 | 224 | 355 | 564 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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