chitin
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Chitin is a linear polysaccharide composed of repeating β(1,4)-N-acetyl-D-glucosamine units. As the second most abundant natural polysaccharide, chitin is known as the primary component of fungi cell wall, it also present in marine invertebrates, insects, and can be produced by bacteria.
References
Hofmann, A. (1929). Über den enzymatischen Abbau des Chitins und Chitosans [On the enzymatic degradation of chitin and chitosan] (Thesis). Zurich, Switzerland: University of Zurich.
Matyjaszewski, K., Möller, M., Schmidt, H., & Ueda, M. (2012). Polymer science: a comprehensive reference. Elsevier.
CAZyme Gene Cluster:
| Substrate | Genome_ID | CGC_ID | CGC_Content | PUL_ID | Species Name |
|---|---|---|---|---|---|
| chitin | FungiDB-61_AfijiensisCBS313.89 |
3.A.1,GH20,3.A.16,null,null,2.A.1,null,AA7
|
PUL0577 | Aspergillus fijiensis CBS 313.89 | |
| chitin | FungiDB-61_AfumigatusA1163 |
2.A.16,null,null,GH18,null,GH20
|
PUL0344 | Aspergillus fumigatus A1163 | |
| chitin | FungiDB-61_AnidulansFGSCA4 |
GH18,null,2.A.1
|
PUL0269 | Aspergillus nidulans FGSC A4 | |
| chitin | FungiDB-61_AochraceoroseusIBT24754 |
GH18,2.A.47,null,GH18
|
PUL0497 | Aspergillus ochraceoroseus IBT 24754 | |
| chitin | FungiDB-61_CaurisB8441 |
GH18,2.A.55,null,null,3.A.1
|
PUL0269 | Candida auris strain B8441 | |
| chitin | FungiDB-61_Ccinereaokay7-130 |
GH18,null,3.A.1
|
PUL0269 | Coprinopsis cinerea okayama7#130 | |
| chitin | FungiDB-61_CgraminicolaM1-001 |
2.A.1,null,2.A.1,GH20,null,null,3.A.1
|
PUL0577 | Colletotrichum graminicola M1.001 | |
| chitin | FungiDB-61_FfujikuroiIMI58289 |
GH3,3.A.25,null,GH18,AA4,null,3.A.1
|
PUL0269 | Fusarium fujikuroi IMI 58289 | |
| chitin | FungiDB-61_FfujikuroiIMI58289 |
CE16,null,GH18,null,null,GH3,2.A.67
|
PUL0269 | Fusarium fujikuroi IMI 58289 | |
| chitin | FungiDB-61_FmangiferaeMRC7560 |
3.A.1,5.B.1,null,null,GH20,2.A.1,null,null,1.A.9
|
PUL0577 | Fusarium mangiferae MRC7560 | |
| chitin | FungiDB-61_FoxysporumNRRL32931 |
AA11,null,1.F.1,GT69,null,GH18,3.D.1
|
PUL0269 | Fusarium oxysporum NRRL 32931 | |
| chitin | FungiDB-61_FoxysporumNRRL32931 |
GH20,3.A.16,null,null,2.A.1
|
PUL0344 | Fusarium oxysporum NRRL 32931 | |
| chitin | FungiDB-61_Fvanettenii77134 |
AA3_2,GH18,2.A.1,AA1_3
|
PUL0344 | Fusarium vanettenii 77-13-4 | |
| chitin | FungiDB-61_KdejecticolaCBS10117 |
GH1,null,null,3.A.1
|
PUL0144 | Kwoniella dejecticola CBS 10117 | |
| chitin | FungiDB-61_McanisCBS113480 |
3.A.1,2.A.1,GH18,null,null,2.A.5,null,null,3.A.1,null,2.A.3
|
PUL0269 | Microsporum canis CBS 113480 | |
| chitin | FungiDB-61_Mcircinelloides1006PhL |
GH18,null,GH20,null,null,9.B.106
|
PUL0344 | Mucor circinelloides 1006PhL | |
| chitin | FungiDB-61_PramorumPr-102 |
GH1,3.A.1,null,9.B.191
|
PUL0144 | Phytophthora ramorum strain Pr102 | |
| chitin | FungiDB-61_RlauricolaRL4 |
4.E.1,null,1.I.1,2.A.1,none,GT4,3.A.20,Pkinase,Aminotran_1_2,GH18,null,9.A.63,null,null,3.A.1,null,null,2.A.3,null,null,GH3,null,2.A.1
|
PUL0269 | Raffaelea lauricola RL4 | |
| chitin | FungiDB-61_SparasiticaCBS223-65 |
3.A.1,null,2.A.3,9.B.97,null,null,GH18
|
PUL0144 | Saprolegnia parasitica CBS 223.65 | |
| chitin | FungiDB-61_TtonsuransCBS112818 |
GH18,none,3.A.1,null,null,1.I.1
|
PUL0269 | Trichophyton tonsurans CBS 112818 |