Statistics on FUNGIDB
General Statistics
You are browserling the dbCAN-seq database: FUNGIDB.
Currently the database contains:
Gene statistics
| Total number of genes |
2839235 |
Total number of CAZymes |
84838 |
CGC statistics.
| Total number of CGCs |
1070 |
| Number of annotated CGCs (with substrate) |
1070 |
| Number of CGCs annotated by dbCAN-PUL search (with substrate) |
435 |
| Number of CGCs annotated by eCAMI sub-family (with substrate) |
635 |
| Number of substrates |
29 |
| Number of phyla |
7 |
| Number of genomes |
255 |
| Number of homologous PULs in dbCAN-PUL |
109 |
Genes in CGCs.
| Number of genes in CGCs |
146223 |
| Number of CAZymes in CGCs |
39436 |
Number of CAZymes in annotated CGGs (with substrate) |
2720 |
Gene statistics of annotated CGCs (with substrate).
| |
by dbCAN-PUL search |
by eCAMI sub-family |
| Number of CAZymes in CGCs |
1033 |
1293 |
| Number of TC in CGCs |
754 |
1621 |
| Number of TF in CGCs |
94 |
88 |
| Number of STP in CGCs |
39 |
75 |
| Number of null in CGCs |
870 |
1619 |
MAG statistics.
| # of MAGs containing CAZyme |
255 |
| # of MAGs containing CGC |
254 |
| # of MAGs containing CGC annotated by dbCAN-PUL search |
139 |
| # of MAGs containing CGC annotated by eCAMI sub-family |
158 |
Distribution of CGCs according to substrate predicted by dbCAN-PUL search
Distribution of CGCs by substrate predicted by eCAMI sub-family
Counts of CGCs with the plotted PUL as the best hit from dbCAN-PUL
Counts of CGC-encoding MAGs in each phylum
