cellulose
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Cellulose is well kown as structural polysaccharide of the plant cell wall, consisting of linear glucan chains linked by β-1,4-glycosidic bonds at different polymerization degree. It can also be secreted from bacteria for biofilm formation.
References
Crawford, R. L. (1981). Lignin biodegradation and transformation. New York: John Wiley and Sons. ISBN 978-0-471-05743-7.
Updegraff D. M. (1969). "Semimicro determination of cellulose in biological materials". Analytical Biochemistry. 32 (3): 420–424. doi:10.1016/S0003-2697(69)80009-6
Romeo, T. (2008). Bacterial biofilms (pp. 258–263). Berlin: Springer.
CAZyme Gene Cluster:
| Substrate | Genome_ID | CGC_ID | CGC_Content | PUL_ID | Species Name |
|---|---|---|---|---|---|
| cellulose | FungiDB-61_AaculeatusATCC16872 |
GH30_3,null,2.A.1,null,null,2.A.7,null,3.D.1,Fork_head,null,GH95,null,9.B.106
|
PUL0084 | Aspergillus aculeatus ATCC 16872 | |
| cellulose | FungiDB-61_AcristatusGZAAS20.1005 |
2.A.1,PL3_2,PL3_2,null,null,2.A.1
|
PUL0320 | Aspergillus cristatus GZAAS20.1005 | |
| cellulose | FungiDB-61_AinvadansNJM9701 |
3.D.1,4.C.1,null,GH5_20,null,null,GH5_20
|
PUL0320 | Aphanomyces invadans NJM9701 | |
| cellulose | FungiDB-61_AnigerN402ATCC64974 |
GH10,GH62,AA1,null,GH30_3,2.A.1
|
PUL0084 | Aspergillus niger strain N402 (ATCC64974) | |
| cellulose | FungiDB-61_AsteyniiIBT23096 |
9.A.26,null,2.A.3,GH5_22,1.I.1,null,null,GH10
|
PUL0320 | Aspergillus steynii IBT 23096 | |
| cellulose | FungiDB-61_AterreusNIH2624 |
3.E.1,null,1.A.8,GH5_7,PL3_2
|
PUL0320 | Aspergillus terreus NIH2624 | |
| cellulose | FungiDB-61_FcircinatumNRRL25331 |
AA2_e1,null,PL3_2,null,null,2.A.1,2.A.21,none,PL9_3
|
PUL0320 | Fusarium circinatum NRRL 25331 | |
| cellulose | FungiDB-61_Foxysporum26406 |
GH5_7,2.A.1,null,null,GH5_16
|
PUL0083 | Fusarium oxysporum f. sp. melonis 26406 | |
| cellulose | FungiDB-61_FoxysporumFo47 |
PL3_2,null,null,AA1,PL9_3,3.A.1
|
PUL0320 | Fusarium oxysporum Fo47 | |
| cellulose | FungiDB-61_Fvanettenii77134 |
3.A.1,null,null,2.A.1,null,GH5_7,null,null,GH18,PL3_2
|
PUL0320 | Fusarium vanettenii 77-13-4 | |
| cellulose | FungiDB-61_Fvanettenii77134 |
GH27,null,HisKA+HATPase_c+Response_reg,CBM91|GH43_13,null,2.A.1,null,2.A.1
|
PUL0084 | Fusarium vanettenii 77-13-4 | |
| cellulose | FungiDB-61_GirregulareDAOMBR486 |
GH5_20,2.A.18,null,GH5_20
|
PUL0320 | Globisporangium irregulare DAOM BR486 | |
| cellulose | FungiDB-61_GultimumDAOMBR144 |
GH5_20,null,GH5_20,null,null,8.A.66
|
PUL0320 | Globisporangium ultimum DAOM BR144 | |
| cellulose | FungiDB-61_PcapsiciLT1534 |
GH5_20,null,null,2.A.18,GH5_20
|
PUL0320 | Phytophthora capsici LT1534 | |
| cellulose | FungiDB-61_PcapsiciLT1534 |
2.A.59,GH5_20,null,1.F.1,AA6,null,GH5_20
|
PUL0320 | Phytophthora capsici LT1534 | |
| cellulose | FungiDB-61_PeffusaR13 |
GH5_20,null,8.A.68,null,GH5_20|GH5_20,null,GH5_20|GH5_20,null,GH5_20,8.A.68,null,null,1.F.1
|
PUL0320 | Peronospora effusa R13 | |
| cellulose | FungiDB-61_PoryzaeBR32 |
3.A.3,null,GH43_11|CBM91,null,2.A.1,null,CBM6|GH43_29
|
PUL0224 | Pyricularia oryzae BR32 | |
| cellulose | FungiDB-61_SchartarumIBT40293 |
PL3_2,GH10,null,null,2.A.1,null,null,9.B.135
|
PUL0320 | Stachybotrys chartarum IBT 40293 | |
| cellulose | FungiDB-61_SchartarumIBT40293 |
PL3_2,null,null,2.A.1,null,PL9_3
|
PUL0320 | Stachybotrys chartarum IBT 40293 | |
| cellulose | FungiDB-61_SparasiticaCBS223-65 |
GH5_20,2.A.23,GH5_20
|
PUL0320 | Saprolegnia parasitica CBS 223.65 | |
| cellulose | FungiDB-61_SparasiticaCBS223-65 |
GH5_20,null,9.A.63,null,GH5_20,null,null,2.A.29,null,null,CBM20|CBM47
|
PUL0320 | Saprolegnia parasitica CBS 223.65 | |
| cellulose | FungiDB-61_TstipitatusATCC10500 |
2.A.1,2.A.1,GH30_3,null,GH95
|
PUL0084 | Talaromyces stipitatus ATCC 10500 |