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CAZyme Information: sr12886-t26_1-p1

You are here: Home > Sequence: sr12886-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporisorium reilianum
Lineage Basidiomycota; Ustilaginomycetes; ; Ustilaginaceae; Sporisorium; Sporisorium reilianum
CAZyme ID sr12886-t26_1-p1
CAZy Family GH20
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
394 41453.98 9.3757
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SreilianumSRZ2 6791 999809 118 6673
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in sr12886-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH128 150 372 8.5e-54 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371727 Glyco_hydro_cc 1.02e-50 139 372 4 235
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.68e-233 1 394 1 394
6.84e-233 1 394 1 394
7.33e-209 1 394 1 383
4.29e-181 1 394 1 401
7.86e-173 1 394 1 392

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.32e-50 127 378 193 442
Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]
5.37e-50 132 382 29 278
Chain A, Glyco_hydro_cc domain-containing protein [Trichoderma gamsii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.18e-13 143 344 308 496
Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=asl1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000244 0.999726 CS pos: 28-29. Pr: 0.4550

TMHMM  Annotations      help

There is no transmembrane helices in sr12886-t26_1-p1.