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CAZyme Information: sr10587-t26_1-p1

You are here: Home > Sequence: sr10587-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporisorium reilianum
Lineage Basidiomycota; Ustilaginomycetes; ; Ustilaginaceae; Sporisorium; Sporisorium reilianum
CAZyme ID sr10587-t26_1-p1
CAZy Family AA2
CAZyme Description related to gmc type oxidoreductase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
627 FQ311452|CGC10 67344.28 6.8811
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SreilianumSRZ2 6791 999809 118 6673
Gene Location Start: 1160045; End:1161928  Strand: +

Full Sequence      Download help

MGLFSSPTLL  PDASAYATPA  NLAPQTVDEA  QKAKSYDFIV  CGGGTAGCVI  ASRLSEDPNT60
SVLVLEAGGN  NDALEVKAPL  IFTKNFKTER  DWDYTTTPQR  AVLNKEMQWP  RGKLIGGSSS120
INAMMYHHCA  PSDYDEWSEK  FNCKGWSYKE  LLPYLNRAEK  YTPHASQPDV  KAEERGSSGL180
WQTGHSSYKA  EATSKGFVNA  CVEVGIPFNA  DLNTHRGSEG  VTQFTTFIDS  SGRRSSAATA240
YLPLEVQKRP  NLTIGINVMV  NRILFDRTGA  RPKAIAVEMQ  NKQGGQKYYA  AAKQRVVLCG300
GAINSPQTLM  LSGVGPAATL  KKHGIPVVVD  NAMVGERLSD  HLCHTTINAR  AKPAHTLDYL360
GSDIKAIPSL  ARWLVTGGGP  VSSNAGEAAA  FVRCNDESLP  LVNALTKPEN  RPQFFGSLGK420
GPDIELICTP  LAYNDHGALP  APAGTGCISI  VGLNVRPRSK  GTISIRSADA  WDKAVVDPKY480
FSDPDDNDRK  VTLAGMRLAI  AVAQANAMQP  YLEHYKSDDE  DDFYWPVSAT  DPSKLTDDQL540
MKFICKRAFT  LYHPVGTVKM  GPDANDSVVD  TSLHVHGVDG  LVVCDASIFP  EQISGHPTAA600
VIAVAEKAAE  LLKGVAADKA  VSLSSRL627

Enzyme Prediction      help

No EC number prediction in sr10587-t26_1-p1.

CAZyme Signature Domains help

Created with Snap3162941251561882192502823133443764074384705015325645951566AA3
Family Start End Evalue family coverage
AA3 34 613 1e-172 0.9947183098591549

CDD Domains      download full data without filtering help

Created with Snap31629412515618821925028231334437640743847050153256459531616PRK0210633617BetA457608GMC_oxred_C35602PLN02785101343GMC_oxred_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 3.55e-136 31 616 1 535
choline dehydrogenase; Validated
225186 BetA 9.84e-126 33 617 5 538
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 6.33e-43 457 608 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 1.59e-41 35 602 55 566
Protein HOTHEAD
366272 GMC_oxred_N 7.30e-38 101 343 13 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Created with Snap3162941251561882192502823133443764074384705015325645951627CBQ72101.1|AA3_21627SJX61973.1|AA3_21624CDS82315.1|AA3_21619CDI52744.1|AA3_21623ULM60689.1|AA3_2
Hit ID E-Value Query Start Query End Hit Start Hit End
CBQ72101.1|AA3_2 0.0 1 627 1 627
SJX61973.1|AA3_2 0.0 1 627 1 627
CDS82315.1|AA3_2 0.0 1 624 1 624
CDI52744.1|AA3_2 0.0 1 619 1 619
ULM60689.1|AA3_2 1.35e-265 1 623 1 622

PDB Hits      download full data without filtering help

Created with Snap316294125156188219250282313344376407438470501532564595336166ZH7_A346166YRU_AAA346166YS1_AAA346165NCC_A346167AV4_AAA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6ZH7_A 1.49e-75 33 616 5 564
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YRU_AAA 4.04e-75 34 616 6 564
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YS1_AAA 4.04e-75 34 616 6 564
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
5NCC_A 5.83e-75 34 616 22 580
Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]
7AV4_AAA 7.87e-75 34 616 82 640
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Created with Snap31629412515618821925028231334437640743847050153256459529616sp|A0A3B1EFP9|STR4_STRTC37613sp|P64264|Y1310_MYCBO37613sp|P9WMV4|Y1279_MYCTO37613sp|P9WMV5|Y1279_MYCTU33621sp|Q988C9|4PADH_RHILO
Hit ID E-Value Query Start Query End Hit Start Hit End Description
sp|A0A3B1EFP9|STR4_STRTC 8.99e-130 29 616 29 615
Dehydrogenase str4 OS=Strobilurus tenacellus OX=41251 GN=str4 PE=1 SV=1
sp|P64264|Y1310_MYCBO 1.74e-91 37 613 6 527
Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB1310 PE=3 SV=1
sp|P9WMV4|Y1279_MYCTO 1.74e-91 37 613 6 527
Uncharacterized GMC-type oxidoreductase MT1316 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1316 PE=3 SV=1
sp|P9WMV5|Y1279_MYCTU 1.74e-91 37 613 6 527
Uncharacterized GMC-type oxidoreductase Rv1279 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv1279 PE=1 SV=1
sp|Q988C9|4PADH_RHILO 3.70e-80 33 621 4 542
4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999923 0.000132

TMHMM  Annotations      help

There is no transmembrane helices in sr10587-t26_1-p1.