logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: mRNA_M_BR32_EuGene_00121271-p1

You are here: Home > Sequence: mRNA_M_BR32_EuGene_00121271-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pyricularia oryzae
Lineage Ascomycota; Sordariomycetes; ; Pyriculariaceae; Pyricularia; Pyricularia oryzae
CAZyme ID mRNA_M_BR32_EuGene_00121271-p1
CAZy Family GH76
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
229 23407.16 7.5147
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PoryzaeBR32 14781 N/A 432 14349
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in mRNA_M_BR32_EuGene_00121271-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 18 186 1.4e-71 0.9940119760479041

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 4.29e-06 18 186 1 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.46e-140 1 229 1 229
1.46e-140 1 229 1 229
3.46e-82 1 192 1 191
3.31e-64 4 193 6 196
6.30e-60 4 191 6 194

PDB Hits      help

mRNA_M_BR32_EuGene_00121271-p1 has no PDB hit.

Swiss-Prot Hits      help

mRNA_M_BR32_EuGene_00121271-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000503 0.999461 CS pos: 17-18. Pr: 0.9702

TMHMM  Annotations      help

There is no transmembrane helices in mRNA_M_BR32_EuGene_00121271-p1.