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CAZyme Information: mRNA_M_BR32_EuGene_00110311-p1

You are here: Home > Sequence: mRNA_M_BR32_EuGene_00110311-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pyricularia oryzae
Lineage Ascomycota; Sordariomycetes; ; Pyriculariaceae; Pyricularia; Pyricularia oryzae
CAZyme ID mRNA_M_BR32_EuGene_00110311-p1
CAZy Family GH47
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
673 73603.79 9.7208
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PoryzaeBR32 14781 N/A 432 14349
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in mRNA_M_BR32_EuGene_00110311-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 328 649 4.5e-46 0.9107692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227721 Pgu1 6.65e-24 297 612 82 429
Polygalacturonase [Carbohydrate transport and metabolism].
403800 Pectate_lyase_3 2.39e-07 299 386 3 95
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
395231 Glyco_hydro_28 7.12e-05 333 652 11 311
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 152 673 1 522
1.67e-227 174 673 18 514
1.36e-226 162 673 7 514
8.32e-199 158 673 4 519
7.30e-158 158 660 2 503

PDB Hits      help

mRNA_M_BR32_EuGene_00110311-p1 has no PDB hit.

Swiss-Prot Hits      help

mRNA_M_BR32_EuGene_00110311-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000061 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in mRNA_M_BR32_EuGene_00110311-p1.