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CAZyme Information: mRNA_M_BR32_EuGene_00098511-p1

You are here: Home > Sequence: mRNA_M_BR32_EuGene_00098511-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pyricularia oryzae
Lineage Ascomycota; Sordariomycetes; ; Pyriculariaceae; Pyricularia; Pyricularia oryzae
CAZyme ID mRNA_M_BR32_EuGene_00098511-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
464 BR32_scaffold00012|CGC2 51410.81 5.8189
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PoryzaeBR32 14781 N/A 432 14349
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in mRNA_M_BR32_EuGene_00098511-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 67 419 1.6e-64 0.963076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 8.96e-43 89 422 14 316
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 1.89e-25 142 413 117 364
Probable polygalacturonase At3g15720
215426 PLN02793 1.98e-25 80 429 90 417
Probable polygalacturonase
177865 PLN02218 3.51e-25 144 416 164 421
polygalacturonase ADPG
215540 PLN03010 2.18e-22 60 423 61 391
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 464 1 464
3.66e-221 1 453 1 456
3.66e-221 1 453 1 456
3.66e-221 1 453 1 456
3.66e-221 1 453 1 456

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.08e-51 33 428 1 382
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
5.53e-19 89 419 31 341
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
2.34e-18 89 421 39 338
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
4.27e-18 89 421 39 338
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.35e-17 89 336 31 254
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.47e-158 46 423 50 425
Probable exopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxB PE=3 SV=1
2.56e-157 46 423 55 430
Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgxB PE=2 SV=1
1.23e-156 46 423 49 424
Probable exopolygalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgxB PE=3 SV=2
1.75e-156 46 423 49 424
Probable exopolygalacturonase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgxB PE=3 SV=1
1.05e-154 60 441 64 444
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgxB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001184 0.998808 CS pos: 18-19. Pr: 0.9602

TMHMM  Annotations      help

There is no transmembrane helices in mRNA_M_BR32_EuGene_00098511-p1.