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CAZyme Information: mRNA_M_BR32_EuGene_00077091-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pyricularia oryzae | |||||||||||
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| Lineage | Ascomycota; Sordariomycetes; ; Pyriculariaceae; Pyricularia; Pyricularia oryzae | |||||||||||
| CAZyme ID | mRNA_M_BR32_EuGene_00077091-p1 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.55:24 | 3.2.1.37:1 | 3.2.1.55:20 | 3.2.1.37:1 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH54 | 25 | 340 | 5.5e-159 | 0.9936708860759493 |
| CBM42 | 363 | 498 | 6.1e-41 | 0.9264705882352942 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 401229 | ArabFuran-catal | 0.0 | 25 | 339 | 1 | 315 | Alpha-L-arabinofuranosidase B, catalytic. Members of this family, which are present in fungal alpha-L-arabinofuranosidase B, adopt a beta-sandwich fold similar to that of Concanavalin A-like lectins/glucanase. The beta-sandwich fold consists of two anti-parallel beta-sheets with seven and and six strands, respectively. In addition, there are four helices outside of the beta-strands. The beta-sandwich strands are closely packed and curved with a jelly roll topology, creating a small catalytic pocket. The domain catalyzes the hydrolysis of alpha-1,2-, alpha-1,3- and alpha-1,5-L-arabinofuranosidic bonds in L-arabinose-containing hemicelluloses such as arabinoxylan and L-arabinan. |
| 398781 | AbfB | 3.78e-41 | 365 | 498 | 12 | 137 | Alpha-L-arabinofuranosidase B (ABFB) domain. This family consists of several fungal alpha-L-arabinofuranosidase B proteins. L-Arabinose is a constituent of plant-cell-wall poly-saccharides. It is found in a polymeric form in L-arabinan, in which the backbone is formed by 1,5-a- linked l-arabinose residues that can be branched via 1,2-a- and 1,3-a-linked l-arabinofuranose side chains. AbfB hydrolyzes 1,5-a, 1,3-a and 1,2-a linkages in both oligosaccharides and polysaccharides, which contain terminal non-reducing l-arabinofuranoses in side chains. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 4 | 503 | 1 | 500 | |
| 1.80e-258 | 12 | 503 | 15 | 506 | |
| 1.03e-250 | 11 | 503 | 14 | 506 | |
| 1.03e-250 | 11 | 503 | 14 | 506 | |
| 1.03e-250 | 11 | 503 | 14 | 506 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.01e-212 | 22 | 503 | 1 | 482 | GH54 a-l-arabinofuranosidase soaked with aziridine inhibitor [Aspergillus luchuensis IFO 4308] |
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| 1.96e-212 | 24 | 503 | 2 | 481 | Crystal structure of arabinofuranosidase [Aspergillus luchuensis],1WD4_A Crystal structure of arabinofuranosidase complexed with arabinose [Aspergillus luchuensis],6SXS_AAA Chain AAA, Alpha-L-arabinofuranosidase B [Aspergillus luchuensis] |
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| 5.60e-212 | 24 | 503 | 2 | 481 | E221Q mutant of GH54 a-l-arabinofuranosidase soaked with 4-nitrophenyl a-l-arabinofuranoside [Aspergillus luchuensis IFO 4308] |
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| 1.60e-211 | 24 | 503 | 2 | 481 | Chain A, alpha-L-arabinofuranosidase B [Aspergillus luchuensis],2D44_A Chain A, alpha-L-arabinofuranosidase B [Aspergillus luchuensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.64e-247 | 12 | 503 | 15 | 506 | Probable alpha-L-arabinofuranosidase B OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=abfB PE=3 SV=1 |
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| 8.79e-246 | 8 | 503 | 6 | 500 | Alpha-L-arabinofuranosidase OS=Hypocrea jecorina OX=51453 GN=abf1 PE=2 SV=1 |
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| 5.87e-244 | 8 | 503 | 6 | 500 | Arabinofuranosidase/B-xylosidase OS=Trichoderma koningii OX=97093 GN=xyl1 PE=3 SV=1 |
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| 1.04e-243 | 12 | 503 | 15 | 506 | Probable alpha-L-arabinofuranosidase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=abfB PE=3 SV=1 |
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| 1.07e-239 | 7 | 503 | 7 | 510 | Alpha-L-arabinofuranosidase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=abfB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000296 | 0.999679 | CS pos: 23-24. Pr: 0.9607 |