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CAZyme Information: jhhlp_006672-t41_1-p1

You are here: Home > Sequence: jhhlp_006672-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lomentospora prolificans
Lineage Ascomycota; Sordariomycetes; ; Microascaceae; Lomentospora; Lomentospora prolificans
CAZyme ID jhhlp_006672-t41_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
496 52836.90 4.9016
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_LprolificansJHH5317 8768 N/A 208 8560
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 27 469 6.4e-194 0.9932279909706546

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 7.90e-24 10 471 16 429
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
405300 Glyco_hydr_30_2 3.95e-15 28 338 3 354
O-Glycosyl hydrolase family 30.
407314 Glyco_hydro_30C 6.30e-09 378 468 1 63
Glycosyl hydrolase family 30 beta sandwich domain.
307945 Glyco_hydro_30 2.78e-08 42 240 3 197
Glycosyl hydrolase family 30 TIM-barrel domain.
396577 Glyco_hydro_59 9.47e-08 59 337 20 251
Glycosyl hydrolase family 59.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.73e-243 3 475 7 482
6.86e-226 3 475 7 464
6.86e-226 3 475 7 464
3.13e-188 24 474 49 497
1.63e-185 18 474 17 475

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.09e-185 26 474 2 451
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
6.25e-185 20 474 2 458
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
2.37e-128 29 469 24 470
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
2.18e-127 29 469 95 541
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
1.14e-106 10 470 8 453
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.89e-186 18 474 17 475
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
2.95e-12 29 419 88 495
Putative glucosylceramidase 4 OS=Caenorhabditis elegans OX=6239 GN=gba-4 PE=3 SV=2
1.37e-08 28 242 92 301
Putative glucosylceramidase 3 OS=Caenorhabditis elegans OX=6239 GN=gba-3 PE=3 SV=1
2.96e-07 29 409 87 483
Putative glucosylceramidase 1 OS=Caenorhabditis elegans OX=6239 GN=gba-1 PE=1 SV=2
1.03e-06 31 416 31 377
Galactocerebrosidase OS=Salmo salar OX=8030 GN=galc PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000459 0.999526 CS pos: 18-19. Pr: 0.9707

TMHMM  Annotations      help

There is no transmembrane helices in jhhlp_006672-t41_1-p1.